RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Gpr137Q80ZU9 396 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Zfpm2Q8CCH7 1151 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Abhd17cQ8VCV1 320 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 NpntQ91V88 561 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 SmoxQ99K82 555 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Oosp3G5E8D7 195 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Lgals1P16045 135 aaKnown RBP15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Adrb1P34971 466 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rpl12P35979 165 aaKnown RBP15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 StsP50427 624 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr18Q0VAX9 331 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 DmknQ6P253 517 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 AspaQ8R3P0 312 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Nsa2Q9CR47 260 aaKnown RBP15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr250E9PV37 331 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Mep1aP28825 747 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rab18P35293 206 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Icam5Q60625 917 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Il15raQ60819 263 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Cldn12Q9ET43 244 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr64F8VPZ8 307 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Mtnd4lP03903 98 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Mmp12P34960 473 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1507Q0VEP0 313 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Xkr8Q8C0T0 401 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1020Q8VFK7 317 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rpl11Q9CXW4 178 aaKnown RBP15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fam170bE9PXT9 378 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr574F8VQ18 346 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Alkal1J3QPP8 127 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Bcl7cO08664 217 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Dgcr2P98154 548 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ltc4sQ60860 150 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fam109aQ8BH49 266 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Cotl1Q9CQI6 142 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 C1qtnf3Q9ES30 246 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Isg20Q9JL16 300 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 P01641 117 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Id1P20067 168 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Slc19a1P41438 512 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gpr85P60894 370 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gramd2aQ3V3G7 320 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 ShhQ62226 437 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 1810024B03RikQ8BWE1 200 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 CcnqQ8QZR8 250 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr510Q8VEW6 314 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm21721J3QMK7 227 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr166Q8VGX2 312 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Sned1Q70E20 1403 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Zfp873A0A1B0GT64 667 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Csf2rbP26955 896 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Isl1P61372 349 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr145Q60882 310 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Dcaf12l2Q8BGW4 469 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Tmem242Q8VCR3 140 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Tctex1d1Q9D5I4 173 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Foxo1Q9R1E0 652 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Togaram1Q6A070 1776 aaKnown RBP15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Emp1P47801 160 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Nufip2Q5F2E7 692 aaKnown RBP15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm2aQ60648 193 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Barx1Q9ER42 254 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rnf32Q9JIT1 368 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Jag1Q9QXX0 1218 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Tusc2Q9WVF8 110 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Esp3J3QN49 87 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Foxa1P35582 468 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ell3Q80VR2 395 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Znf775Q8BI73 538 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ube2j1Q9JJZ4 318 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ak3Q9WTP7 227 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Dcst2A0A140LIJ0 701 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1055A2AVX9 346 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fcgr2P08101 330 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Hnrnpa3Q8BG05 379 aaKnown RBP15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Lair1Q8BG84 263 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 PisdQ8BSF4 406 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Alkbh3Q8K1E6 286 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Dock7Q8R1A4 2130 aaKnown RBP15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr642Q924X8 314 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ahctf1Q8CJF7 2243 aaKnown RBP15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Psmb5O55234 264 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 AcheP21836 614 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Slc11a1P41251 548 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Amdhd2Q8JZV7 409 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr658Q8VGV5 323 aa15.16■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 AcacaQ5SWU9 2345 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 F7P70375 446 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fgf13P70377 245 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Magt1Q9CQY5 335 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Kcnk4O88454 398 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gabrg2P22723 474 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 HhipQ7TN16 700 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 1700086D15RikQ9D9E9 151 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ebf4Q8K4J2 599 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr994Q8VF73 314 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Tomm34Q9CYG7 309 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fam13cQ9DBR2 601 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Acss2Q9QXG4 701 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Mamdc4A2AJA7 1228 aa15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 61.9 ms