RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Tomm20Q9DCC8 145 aa20.28■□□□□ 0.84
Cln6-201ENSMUST00000034776 Tanc2A2A690 1994 aa20.28■□□□□ 0.84
Cln6-201ENSMUST00000034776 Gm20219A0A1B0GRQ3 87 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Gm14409A2ARR8 349 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 P2rx6O54803 389 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Grb2Q60631 217 aaKnown RBP20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Olfr517Q7TRU4 314 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Chrnb4Q8R493 495 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Mrgpra6Q91ZC6 301 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Spaca5A2AE20 160 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Olfr1255A2AUA4 310 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Gm15737D3YZR0 106 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Wisp3D3Z5L9 354 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Amy2P00688 508 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Cdh3P10287 822 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Itgb2P11835 771 aaKnown RBP20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Map2k4P47809 397 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 SryQ05738 395 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Slc17a1Q61983 465 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 H2-M2Q6W9L1 343 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 SynbQ8BI41 618 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Tnfsfm13Q8BXS2 410 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 YbeyQ8CAV0 164 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Pdzk1ip1Q9CQH0 114 aa20.27■□□□□ 0.84
Cln6-201ENSMUST00000034776 Gm4779A0A1B0GR91 561 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Olfr329-psM9MMK4 331 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 S1pr1O08530 382 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Capn1O35350 713 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Ccl9P51670 122 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Hmga2P52927 108 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Ikzf2P81183 526 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Inca1Q6PKN7 231 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Cggbp1Q8BHG9 167 aaKnown RBP20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 TbceQ8CIV8 524 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Olfr446Q8VEV0 308 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Tm7sf3Q9CRG1 565 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Neu3Q9JMH7 418 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Prss47A0A0N4SVQ0 395 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Fbxw27A0A1D5RLF0 466 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Bnip2O54940 326 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Hdac3O88895 424 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Pnliprp2P17892 482 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Slc25a47Q6IS41 310 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Ubac2Q8R1K1 345 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Olfr186Q8VEX5 309 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Ddb2Q99J79 432 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Dcun1d5Q9CXV9 237 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Dusp3Q9D7X3 185 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Tmem225Q9D9S2 230 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 1700020A23RikQ9DA59 131 aa20.26■□□□□ 0.83
Cln6-201ENSMUST00000034776 Zfp229E9PWT2 705 aa20.25■□□□□ 0.83
Cln6-201ENSMUST00000034776 Olfr68E9PYY2 315 aa20.25■□□□□ 0.83
Cln6-201ENSMUST00000034776 Pou3f2P31360 445 aa20.25■□□□□ 0.83
Cln6-201ENSMUST00000034776 Tamm41Q3TUH1 337 aa20.25■□□□□ 0.83
Cln6-201ENSMUST00000034776 Fbxw16Q497Z0 464 aa20.25■□□□□ 0.83
Cln6-201ENSMUST00000034776 SprQ64105 261 aa20.25■□□□□ 0.83
Cln6-201ENSMUST00000034776 SrmQ64674 302 aa20.25■□□□□ 0.83
Cln6-201ENSMUST00000034776 GnalQ8CGK7 381 aa20.25■□□□□ 0.83
Cln6-201ENSMUST00000034776 Cnppd1Q8K158 407 aa20.25■□□□□ 0.83
Cln6-201ENSMUST00000034776 Rspo1Q9Z132 265 aa20.25■□□□□ 0.83
Cln6-201ENSMUST00000034776 Gm45736A0A1B0GS18 427 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Vmn2r107E9PZJ7 861 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Cbr2P08074 244 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Stx4P70452 298 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Prr27Q3SYJ2 352 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Plcz1Q8K4D7 647 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Defb8Q91V82 60 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Znf24Q91VN1 368 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 TardbpQ921F2 414 aaKnown RBP20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Q9CQM1 111 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Actr6Q9D864 396 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 GrinaQ9ESF4 345 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Pard6gQ9JK84 382 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Gm7951E9Q0A2 213 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Gm6482F6YHC1 213 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Gm17124F6ZIG1 213 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Phf21aQ6ZPK0 659 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Fam57bQ7TNV1 275 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Pif1Q80SX8 650 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 SargQ8BI29 606 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Las2Q8CB14 526 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Fate1Q8CEK7 99 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 ApehQ8R146 732 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Dnmt3lQ9CWR8 421 aaKnown RBP20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Dnajc4Q9D844 244 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Cldnd2Q9D9H2 167 aa20.24■□□□□ 0.83
Cln6-201ENSMUST00000034776 Hacd4A2AKM2 232 aa20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 BC035044E0CXF8 138 aa20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 Gm3099J3QPA5 205 aa20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 Ear3O35290 156 aa20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 Zmat3O54836 290 aaKnown RBP20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 Camk2bP28652 542 aa20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 Csrp2P97314 193 aaKnown RBP20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 RelbQ04863 558 aa20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 Nkain3Q3URJ8 181 aa20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 Macrod2Q3UYG8 475 aa20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 Opa3Q505D7 179 aa20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 Ldlrad4Q8BWJ4 306 aa20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 Uxs1Q91XL3 420 aa20.23■□□□□ 0.83
Cln6-201ENSMUST00000034776 Steap4Q923B6 470 aa20.23■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms