RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Olfr111Q7TRK1 317 aa11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Kiaa0895lQ810A5 467 aa11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Zfp947Q8BIQ6 437 aa11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Eif1axQ8BMJ3 144 aaKnown RBP11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Mmp28Q8CGV8 520 aa11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Olfr536Q8VFE9 307 aa11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Utp23Q9CX11 249 aaKnown RBP11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Cnih4Q9CX13 139 aa11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 GmfgQ9ERL7 142 aa11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Stard10Q9JMD3 291 aa11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Lama1P19137 3084 aa11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Wnk2Q3UH66 2149 aa11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Ice1E9Q286 2241 aaKnown RBP11.27□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Gm3727J3QM54 205 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Prss12O08762 761 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Ear3O35290 156 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Amy2P00688 508 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Bdkrb2P32299 392 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Cdx2P43241 311 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Fkbp2P45878 140 aaKnown RBP11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Defa-rs12P50716 91 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Dnase2P56542 353 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 CtseP70269 397 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 St3gal2Q11204 350 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Dio1Q61153 257 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Ino80cQ8BHA0 191 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 RhbgQ8BUX5 455 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Asb13Q8VBX0 278 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Olfr502Q8VG09 314 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Zfp959Q91VM8 539 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 CsprsQ99388 208 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Smim3Q99PE5 60 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Zdhhc4Q9D6H5 343 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Lin37Q9D8N6 246 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Vmn1r172Q9EPS4 313 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Trav10nA0A075B622 114 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Trav10A0A075B642 114 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Ccdc9bA3KGF9 545 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Zfp616J3QN14 987 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Zfp955bL7N232 545 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Itln1O88310 313 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 MosP00536 390 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Tcrg-V1P06325 135 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 CryabP23927 175 aaKnown RBP11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Ikzf2P81183 526 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Dok1P97465 482 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Jsrp1Q3MI48 332 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 St6gal2Q76K27 524 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Mgat4aQ812G0 535 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Klhl24Q8BRG6 600 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Lsm11Q8BUV6 361 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Lmf2Q8C3X8 702 aaKnown RBP11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 CdnfQ8CC36 187 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Katnal1Q8K0T4 488 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Rp2Q9EPK2 347 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Kcne4Q9WTW3 170 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Col5a1O88207 1838 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Olfr1039A2ARY0 319 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Gm438B1ASB3 393 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Gm21767J3QPV5 180 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Zfp2P08043 459 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Igsf6P0C6B7 237 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Pax9P47242 342 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 SelenopP70274 380 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Nhlh1Q02576 133 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Fbxw22Q5XG67 466 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 MffQ6PCP5 291 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Scgb2b2Q6UGQ3 114 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Entpd8Q8K0L2 497 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Nectin4Q8R007 508 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Olfr1038Q8VGS1 319 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Mob1aQ921Y0 216 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Stoml2Q99JB2 353 aaKnown RBP11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Xrcc2Q9CX47 278 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Znf319Q9ERR8 581 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Sfrp5Q9WU66 314 aa11.26□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Dock11A2AF47 2073 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Ighv1-42A0A0A6YY38 117 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 IqckD3YYL3 290 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 EdaO54693 391 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Tgfbr3O88393 850 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Il4P07750 140 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 HckP08103 524 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Zfp36l2P23949 484 aaKnown RBP11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Ccl9P51670 122 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Fabp2P55050 132 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Zdhhc8Q5Y5T5 762 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Spin2cQ6NVE3 257 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Fam122bQ6NZE7 255 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Tmed3Q78IS1 221 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 TxnipQ8BG60 397 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Bhlhe23Q8BGW3 223 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 LipkQ8BM14 398 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Tmem144Q8VEH0 348 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Olfr800Q8VFH7 311 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 NifkQ91VE6 317 aaKnown RBP11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Pop4Q9CR08 221 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Tex29Q9DA77 186 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 GltpQ9JL62 209 aa11.25□□□□□ -0.61
Rnf4-201ENSMUST00000030992 Sult6b2B7ZWN4 290 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms