RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 CMTM4Q8IZR5 234 aa14.89□□□□□ -0.03
PHGDH-234ENST00000642041 OR5M9Q8NGP3 310 aa14.89□□□□□ -0.03
PHGDH-234ENST00000642041 ENKURQ8TC29 256 aa14.89□□□□□ -0.03
PHGDH-234ENST00000642041 SMIM4Q8WVI0 70 aa14.89□□□□□ -0.03
PHGDH-234ENST00000642041 BCL2L2Q92843 193 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-234ENST00000642041 PPP1R14AQ96A00 147 aa14.89□□□□□ -0.03
PHGDH-234ENST00000642041 ZNF837Q96EG3 531 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-234ENST00000642041 URM1Q9BTM9 101 aaKnown RBP14.89□□□□□ -0.03
PHGDH-234ENST00000642041 ACTR6Q9GZN1 396 aa14.89□□□□□ -0.03
PHGDH-234ENST00000642041 CRIM1Q9NZV1 1036 aa14.89□□□□□ -0.03
PHGDH-234ENST00000642041 EIF3KQ9UBQ5 218 aaKnown RBP14.89□□□□□ -0.03
PHGDH-234ENST00000642041 SLC7A11Q9UPY5 501 aa14.89□□□□□ -0.03
PHGDH-234ENST00000642041 NOP16Q9Y3C1 178 aaKnown RBP14.89□□□□□ -0.03
PHGDH-234ENST00000642041 ARID1AO14497 2285 aa14.89□□□□□ -0.03
PHGDH-234ENST00000642041 SONP18583 2426 aaKnown RBP14.88□□□□□ -0.03
PHGDH-234ENST00000642041 ANK3Q12955 4377 aaKnown RBP14.88□□□□□ -0.03
PHGDH-234ENST00000642041 A0A1W2PQ09 198 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 ITGA5P08648 1049 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 STOMP27105 288 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 POU3F4P49335 361 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 BAK1Q16611 211 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 RSPO1Q2MKA7 263 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-234ENST00000642041 C1orf185Q5T7R7 199 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 OTPQ5XKR4 325 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 ZNF585AQ6P3V2 769 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 TFAP2EQ6VUC0 442 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 TOMM5Q8N4H5 51 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 DUSP18Q8NEJ0 188 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 OR5H6Q8NGV6 325 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 PIGTQ969N2 578 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 SGK3Q96BR1 496 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 REEP6Q96HR9 211 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 FAM71F1Q96KD3 344 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-234ENST00000642041 BEX4Q9NWD9 120 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-234ENST00000642041 NPAP1Q9NZP6 1156 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 PROCRQ9UNN8 238 aa14.88□□□□□ -0.03
PHGDH-234ENST00000642041 A0A0G2JMP0 313 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 A0A0X1KG70 313 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 CIB4A0PJX0 185 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 TPD52L2O43399 206 aaKnown RBP14.87□□□□□ -0.03
PHGDH-234ENST00000642041 IL18BPO95998 194 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 HCKP08631 526 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 SNTB1Q13884 538 aaKnown RBP14.87□□□□□ -0.03
PHGDH-234ENST00000642041 TBC1D28Q2M2D7 210 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 C3orf36Q3SXR2 165 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 CLVS2Q5SYC1 327 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 ZNF57Q68EA5 555 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-234ENST00000642041 PLET1Q6UQ28 207 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 LHFPL2Q6ZUX7 228 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 LYPD6Q86Y78 171 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 CIARTQ8N365 385 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-234ENST00000642041 STEAP2Q8NFT2 490 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 OR4M2Q8NGB6 313 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 OR51D1Q8NGF3 324 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 FAM46BQ96A09 425 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 SLC25A28Q96A46 364 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 ADAT3Q96EY9 351 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-234ENST00000642041 SFXN3Q9BWM7 321 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 C14orf119Q9NWQ9 140 aa14.87□□□□□ -0.03
PHGDH-234ENST00000642041 FAM240BA0A1B0GVZ2 78 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 H7C1Q1 480 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 LYRM1O43325 122 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 ICMTO60725 284 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 RBBP9O75884 186 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 CD79AP11912 226 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 MAGEB1P43366 347 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 ACTBP60709 375 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 ACTG1P63261 375 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 SPOCK1Q08629 439 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 DAZAP2Q15038 168 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-234ENST00000642041 P2RY14Q15391 338 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 OR8B8Q15620 311 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 TBRG1Q3YBR2 411 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 CCBE1Q6UXH8 406 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-234ENST00000642041 AKR7LQ8NHP1 331 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 FAM222BQ8WU58 562 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 MRPS24Q96EL2 167 aaKnown RBP14.86□□□□□ -0.03
PHGDH-234ENST00000642041 GPER1Q99527 375 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 PIGMQ9H3S5 423 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 CLEC4AQ9UMR7 237 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 PIGLQ9Y2B2 252 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 MRPS7Q9Y2R9 242 aaKnown RBP14.86□□□□□ -0.03
PHGDH-234ENST00000642041 AMDHD2Q9Y303 409 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 N6AMT1Q9Y5N5 214 aa14.86□□□□□ -0.03
PHGDH-234ENST00000642041 CHD3Q12873 2000 aaKnown RBP14.85□□□□□ -0.03
PHGDH-234ENST00000642041 ZNF816-ZNF321PA0A0X1KG74 233 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 GGT3PA6NGU5 568 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 LDLRAD4O15165 306 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 SLC2A1P11166 492 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 SELEP16581 610 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 COX5AP20674 150 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 AZGP1P25311 298 aaKnown RBP14.85□□□□□ -0.03
PHGDH-234ENST00000642041 OPRM1P35372 400 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 FUT6P51993 359 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 RAG2P55895 527 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 PPA1Q15181 289 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 DNM1P46Q6ZS02 220 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 ANGPTL5Q86XS5 388 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 GABRG1Q8N1C3 465 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 OR13C9Q8NGT0 318 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms