RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 SIGLEC6O43699 453 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 P2RY4P51582 365 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 AADACL3Q5VUY0 350 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 SEMA6DQ8NFY4 1073 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 FAAP24Q9BTP7 215 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 RHOFQ9HBH0 211 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 MFNGO00587 321 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 DIRAS3O95661 229 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 CSTBP04080 98 aaKnown RBP12.82□□□□□ -0.36
SCARB2-221ENST00000640341 HLA-GP17693 338 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 MTCP1P56278 107 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 SULF2Q8IWU5 870 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 LYZL4Q96KX0 146 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 OXGR1Q96P68 337 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 CHRNA10Q9GZZ6 450 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 UQCC1Q9NVA1 299 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 CACNA1EQ15878 2313 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 DBX1A6NMT0 343 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 DHRS7CA6NNS2 312 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 MBTPS2O43462 519 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 XRCC2O43543 280 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 F10P00742 488 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 MUC1P15941 1255 aaPredicted RBP12.82□□□□□ -0.36
SCARB2-221ENST00000640341 TBPP20226 339 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 PHLDA2Q53GA4 152 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 PRSS54Q6PEW0 395 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 WDSUB1Q8N9V3 476 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 CMSS1Q9BQ75 279 aaKnown RBP12.82□□□□□ -0.36
SCARB2-221ENST00000640341 MCTS1Q9ULC4 181 aaKnown RBP12.82□□□□□ -0.36
SCARB2-221ENST00000640341 B3GALT1Q9Y5Z6 326 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 CD37P11049 281 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 FPR2P25090 351 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 ASCL1P50553 236 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 CCL7P80098 99 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 SRSF4Q08170 494 aaKnown RBP12.81□□□□□ -0.36
SCARB2-221ENST00000640341 ZNF616Q08AN1 781 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 PDZK1IP1Q13113 114 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 PABPC1L2AQ5JQF8 200 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 OR2M3Q8NG83 312 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 SLC22A8Q8TCC7 542 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 REEP6Q96HR9 211 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 PECRQ9BY49 303 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 NXT1Q9UKK6 140 aaKnown RBP12.81□□□□□ -0.36
SCARB2-221ENST00000640341 MTCH2Q9Y6C9 303 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 MTRF1O75570 445 aaKnown RBP12.81□□□□□ -0.36
SCARB2-221ENST00000640341 SPINK2P20155 84 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 LPAR6P43657 344 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 PPT1P50897 306 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 SLC25A47Q6Q0C1 308 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 OR14K1Q8NGZ2 314 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 SPACA9Q96E40 222 aaPredicted RBP12.81□□□□□ -0.36
SCARB2-221ENST00000640341 C20orf24Q9BUV8 137 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 RAB18Q9NP72 206 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 PNRC2Q9NPJ4 139 aaKnown RBP12.81□□□□□ -0.36
SCARB2-221ENST00000640341 K7EPK0 472 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 GLULP15104 373 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 PTGDSP41222 190 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 SUMO3P55854 103 aaPredicted RBP12.81□□□□□ -0.36
SCARB2-221ENST00000640341 SWI5Q1ZZU3 235 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 FAM71E2Q8N5Q1 922 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 OR6X1Q8NH79 312 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 C2orf50Q96LR7 162 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 MOB1AQ9H8S9 216 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 OCIAD1Q9NX40 245 aa12.81□□□□□ -0.36
SCARB2-221ENST00000640341 SHANK1Q9Y566 2161 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 A0A1W2PQM1 296 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 RAB19A4D1S5 217 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 PTGER4P35408 488 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 SMCO1Q147U7 214 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 SNAI3Q3KNW1 292 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 FAM76BQ5HYJ3 339 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 SLC30A7Q8NEW0 376 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 FNDC9Q8TBE3 224 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 SCGB3A2Q96PL1 93 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 SLC26A1Q9H2B4 701 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 LPAR3Q9UBY5 353 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 CPAMD8Q8IZJ3 1885 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 ZDBF2Q9HCK1 2354 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 A0A1W2PNV4 684 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 M0R135 149 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 MSR1P21757 451 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 VAX1Q5SQQ9 334 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 PPP1R3BQ86XI6 285 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 TMEM156Q8N614 296 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 ZNF799Q96GE5 643 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 PRELID3BQ9Y3B1 194 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 EML6Q6ZMW3 1958 aa12.8□□□□□ -0.36
SCARB2-221ENST00000640341 CCDC163A0A0D9SF12 145 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 IFNA2P01563 188 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 CBR1P16152 277 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 ITGA3P26006 1051 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 RPL12P30050 165 aaKnown RBP12.79□□□□□ -0.36
SCARB2-221ENST00000640341 KCNJ3P48549 501 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 TAS2R46P59540 309 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 Q7L0L9 218 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 CADM4Q8NFZ8 388 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 MRPL24Q96A35 216 aaKnown RBP12.79□□□□□ -0.36
SCARB2-221ENST00000640341 SPSB2Q99619 263 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 ULBP2Q9BZM5 246 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 TNFSF11O14788 317 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms