RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 GGNBP1Q5YKI7 109 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 ARMC6Q6NXE6 501 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 RPUSD3Q6P087 351 aaKnown RBP18.05■□□□□ 0.48
PMS1-222ENST00000639501 KLHL24Q6TFL4 600 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 Q6ZSR6 202 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 OR13H1Q8NG92 308 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 C19orf12Q9NSK7 152 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 C1orf123Q9NWV4 160 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 TUBD1Q9UJT1 453 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 NPIPA5E9PKD4 350 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 TNFRSF10CO14798 259 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 HPNP05981 417 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 ZNF17P17021 662 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 TMEM151BQ8IW70 566 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 EMG1Q92979 244 aaKnown RBP18.05■□□□□ 0.48
PMS1-222ENST00000639501 NPIPA1Q9UND3 350 aa18.05■□□□□ 0.48
PMS1-222ENST00000639501 PUS1Q9Y606 427 aaKnown RBP eCLIP18.05■□□□□ 0.48
PMS1-222ENST00000639501 SEC16AO15027 2179 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 ALG1L2C9J202 215 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 RAMP1O60894 148 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 OR2C1O95371 312 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 IGKV3-11P04433 115 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 HCKP08631 526 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 LMO1P25800 156 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 NTSR1P30989 418 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 RPS10P46783 165 aaKnown RBP18.04■□□□□ 0.48
PMS1-222ENST00000639501 C1QL2Q7Z5L3 287 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 ABHD12BQ7Z5M8 362 aaPredicted RBP18.04■□□□□ 0.48
PMS1-222ENST00000639501 C1QL4Q86Z23 238 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 C9orf40Q8IXQ3 194 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 GPBAR1Q8TDU6 330 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 ZNF721Q8TF20 911 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 OIT3Q8WWZ8 545 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 DAZLQ92904 295 aaKnown RBP18.04■□□□□ 0.48
PMS1-222ENST00000639501 CHST5Q9GZS9 411 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 KCNJ16Q9NPI9 418 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 LANCL2Q9NS86 450 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 COL6A3P12111 3177 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 XRCC2O43543 280 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 DDAH2O95865 285 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 IFNA17P01571 189 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 HOXB2P14652 356 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 CDCP2Q5VXM1 449 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 YAF2Q8IY57 180 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 HPSE2Q8WWQ2 592 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 MR1Q95460 341 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 SLAMF9Q96A28 289 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 FAM71F1Q96KD3 344 aaPredicted RBP18.04■□□□□ 0.48
PMS1-222ENST00000639501 RARRES2Q99969 163 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 SLC35B3Q9H1N7 401 aa18.04■□□□□ 0.48
PMS1-222ENST00000639501 ZNF727A8MUV8 499 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 GPR37O15354 613 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 TSPAN2O60636 221 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 RNF224P0DH78 156 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 ITGA3P26006 1051 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 MAS1LP35410 378 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 ZNF84P51523 738 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 SLC35A1P78382 337 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 DLX2Q07687 328 aaPredicted RBP18.03■□□□□ 0.48
PMS1-222ENST00000639501 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.03■□□□□ 0.48
PMS1-222ENST00000639501 LUZP4Q9P127 313 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 C14orf166Q9Y224 244 aaKnown RBP18.03■□□□□ 0.48
PMS1-222ENST00000639501 RCL1Q9Y2P8 373 aaKnown RBP18.03■□□□□ 0.48
PMS1-222ENST00000639501 RFNGQ9Y644 331 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 BLACEA4D250 179 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 MBPP02686 304 aaPredicted RBP18.03■□□□□ 0.48
PMS1-222ENST00000639501 NDUFA6P56556 154 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 DNM1P34Q6PK57 102 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 COMMD1Q8N668 190 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 OR8B12Q8NGG6 310 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 JSRP1Q96MG2 331 aaPredicted RBP18.03■□□□□ 0.48
PMS1-222ENST00000639501 CUTCQ9NTM9 273 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 ZDHHC8Q9ULC8 765 aa18.03■□□□□ 0.48
PMS1-222ENST00000639501 IGKV1-9A0A0C4DH69 117 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 CDX1P47902 265 aaPredicted RBP18.02■□□□□ 0.48
PMS1-222ENST00000639501 DEFA6Q01524 100 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 PLCXD2Q0VAA5 305 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 ZNF343Q6P1L6 599 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 GRINAQ7Z429 371 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 OR51T1Q8NGJ9 327 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 NPRL2Q8WTW4 380 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 GPER1Q99527 375 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 NUDT22Q9BRQ3 303 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 OR10A2Q9H208 303 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 PRDM13Q9H4Q3 707 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 GPR84Q9NQS5 396 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 OBP2AQ9NY56 170 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 CLEC1BQ9P126 229 aa18.02■□□□□ 0.48
PMS1-222ENST00000639501 GON4LQ3T8J9 2241 aa18.02■□□□□ 0.47
PMS1-222ENST00000639501 MYO7BQ6PIF6 2116 aa18.02■□□□□ 0.47
PMS1-222ENST00000639501 C2orf72A6NCS6 295 aa18.02■□□□□ 0.47
PMS1-222ENST00000639501 DIRAS3O95661 229 aa18.02■□□□□ 0.47
PMS1-222ENST00000639501 PRH1P02810 166 aa18.02■□□□□ 0.47
PMS1-222ENST00000639501 SEC11BP0C7V7 166 aa18.02■□□□□ 0.47
PMS1-222ENST00000639501 TAS2R46P59540 309 aa18.02■□□□□ 0.47
PMS1-222ENST00000639501 RAP1AP62834 184 aa18.02■□□□□ 0.47
PMS1-222ENST00000639501 HSD17B11Q8NBQ5 300 aa18.02■□□□□ 0.47
PMS1-222ENST00000639501 ADAMTS18Q8TE60 1221 aa18.02■□□□□ 0.47
PMS1-222ENST00000639501 MUCL1Q96DR8 90 aa18.02■□□□□ 0.47
PMS1-222ENST00000639501 DUSP15Q9H1R2 295 aaPredicted RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms