RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 DUX4L3P0CJ86 424 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 DUX4L4P0CJ87 422 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 DUX4L5P0CJ88 424 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 DUX4L6P0CJ89 424 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 DUX4L7P0CJ90 424 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 FAHP16930 419 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 HTR1FP30939 366 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 GNG3P63215 75 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 EGR3Q06889 387 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 RIPPLY1Q0D2K3 151 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 KPNB1Q14974 876 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 DMRTC1Q5HYR2 192 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 BCL2L15Q5TBC7 163 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 METTL11BQ5VVY1 283 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 PLCXD3Q63HM9 321 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 DUX4L9Q6RFH8 374 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 BRD3OSQ6XYD6 125 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 C9orf139Q6ZV77 190 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 MOB3CQ70IA8 216 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 SLC36A1Q7Z2H8 476 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 FGFRL1Q8N441 504 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 FAM216BQ8N7L0 139 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 OR5T2Q8NGG2 359 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 ITFG2Q969R8 447 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 WDR13Q9H1Z4 485 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 SNTG1Q9NSN8 517 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 DUX4Q9UBX2 424 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 MRM2Q9UI43 246 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 PIGLQ9Y2B2 252 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 R4GMQ9 66 aa13.88□□□□□ -0.19
CACNA1A-259ENST00000638114 ZNF732B4DXR9 585 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 P2RY10O00398 339 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 SRSF10O75494 262 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 MTRF1O75570 445 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 DHRS3O75911 302 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 APOL3O95236 402 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 ECDO95905 644 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 KRT8P05787 483 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 PRTN3P24158 256 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 IKZF1Q13422 519 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 CEACAM21Q3KPI0 293 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 FAM76BQ5HYJ3 339 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 STUMQ69YW2 141 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 SSX6Q7RTT6 188 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 OR8J1Q8NGP2 316 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 C1orf147Q96MC9 270 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 WDFY2Q96P53 400 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 TBX15Q96SF7 602 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 ZMAT3Q9HA38 289 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 ENPP5Q9UJA9 477 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 OR52A1Q9UKL2 312 aa13.87□□□□□ -0.19
CACNA1A-259ENST00000638114 MDFIC2A0A1B0GVS7 189 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 NKX6-3A6NJ46 265 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 OR5B21A6NL26 309 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 NDUFB3O43676 98 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 RHBDL1O75783 438 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 RPP14O95059 124 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 MMP9P14780 707 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 ATP6V1E1P36543 226 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 COMPP49747 757 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 CDC42P60953 191 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 ARF6P62330 175 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 C11orf91Q3C1V1 193 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 ZBTB37Q5TC79 503 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 RUSC1-AS1Q66K80 236 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 KRT74Q7RTS7 529 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 ELMOD2Q8IZ81 293 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 YIPF7Q8N8F6 280 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 OR10H4Q8NGA5 316 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 OR5A2Q8NGI9 324 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 RAB3IPQ96QF0 476 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 OR51I2Q9H344 312 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 IMPAD1Q9NX62 359 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 RPUSD1Q9UJJ7 312 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 ORC6Q9Y5N6 252 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 SNX5Q9Y5X3 404 aa13.86□□□□□ -0.19
CACNA1A-259ENST00000638114 A0A1W2PQL4 384 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 H3BNX3 289 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 EI24O14681 340 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 NRASP01111 189 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 OR2T7P0C7T2 308 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 SELLP14151 372 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 AMY2BP19961 511 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 GLRA1P23415 457 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 CFPP27918 469 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 DEFB112Q30KQ8 113 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 LRRC10Q5BKY1 277 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 ZNF684Q5T5D7 378 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 ATPAF1Q5TC12 328 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 ZFP1Q6P2D0 407 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 C3orf56Q8N813 242 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 OR2T27Q8NH04 317 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 RFKQ969G6 155 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 ZDHHC16Q969W1 377 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 SLC25A28Q96A46 364 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 EME1Q96AY2 570 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 SIRPDQ9H106 197 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 DNTTIP1Q9H147 329 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 CNTD2Q9H8S5 307 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 ONECUT1Q9UBC0 465 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms