RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 PLCXD3Q63HM9 321 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 PLEKHG7Q6ZR37 379 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 BTN2A1Q7KYR7 527 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 DOK3Q7L591 496 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 ZDHHC22Q8N966 263 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 OR5T2Q8NGG2 359 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 OR5A2Q8NGI9 324 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 OR2T27Q8NH04 317 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 HPSE2Q8WWQ2 592 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 DACT3Q96B18 629 aaPredicted RBP11.46□□□□□ -0.57
PNKP-228ENST00000637325 C12orf43Q96C57 262 aaKnown RBP11.46□□□□□ -0.57
PNKP-228ENST00000637325 SMURF1Q9HCE7 757 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 ESM1Q9NQ30 184 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 SNTG1Q9NSN8 517 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 KAAG1Q9UBP8 84 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 MRM2Q9UI43 246 aaKnown RBP11.46□□□□□ -0.57
PNKP-228ENST00000637325 ANK2Q01484 3957 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 NKX6-3A6NJ46 265 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 ZNF879B4DU55 563 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 EI24O14681 340 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 AKR7A2O43488 359 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 NDUFB3O43676 98 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 TOX4O94842 621 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 APOL3O95236 402 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 NRASP01111 189 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 TTRP02766 147 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 ALPLP05186 524 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 FAHP16930 419 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 IKZF1Q13422 519 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 TMED1Q13445 227 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 ZIK1Q3SY52 487 aaPredicted RBP11.45□□□□□ -0.58
PNKP-228ENST00000637325 LRRC10Q5BKY1 277 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 FAM76BQ5HYJ3 339 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 ZNF684Q5T5D7 378 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 METTL11BQ5VVY1 283 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 ELMOD2Q8IZ81 293 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 ZNF671Q8TAW3 534 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 TRUB1Q8WWH5 349 aaKnown RBP11.45□□□□□ -0.58
PNKP-228ENST00000637325 EME1Q96AY2 570 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 SEH1LQ96EE3 360 aa11.45□□□□□ -0.58
PNKP-228ENST00000637325 RAB3IPQ96QF0 476 aaPredicted RBP11.45□□□□□ -0.58
PNKP-228ENST00000637325 FGF23Q9GZV9 251 aaPredicted RBP11.45□□□□□ -0.58
PNKP-228ENST00000637325 A0A1W2PQL4 384 aaPredicted RBP11.44□□□□□ -0.58
PNKP-228ENST00000637325 METTL15A6NJ78 407 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 OR5B21A6NL26 309 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 H3BNX3 289 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.44□□□□□ -0.58
PNKP-228ENST00000637325 P2RY10O00398 339 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 SRSF10O75494 262 aaKnown RBP11.44□□□□□ -0.58
PNKP-228ENST00000637325 IGLV3-1P01715 115 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 GLRA1P23415 457 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 ALDH3A2P51648 485 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 ARF6P62330 175 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 UBA52P62987 128 aaKnown RBP11.44□□□□□ -0.58
PNKP-228ENST00000637325 ELF3P78545 371 aaPredicted RBP11.44□□□□□ -0.58
PNKP-228ENST00000637325 ODF4Q2M2E3 257 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 C11orf91Q3C1V1 193 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 DMRTC1Q5HYR2 192 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 CLVS2Q5SYC1 327 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 KRT74Q7RTS7 529 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 SSX6Q7RTT6 188 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 FAM216BQ8N7L0 139 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 ZDHHC16Q969W1 377 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 DUX5Q96PT3 197 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 ADI1Q9BV57 179 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 WDR13Q9H1Z4 485 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 OR51I2Q9H344 312 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 USE1Q9NZ43 259 aa11.44□□□□□ -0.58
PNKP-228ENST00000637325 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.44□□□□□ -0.58
PNKP-228ENST00000637325 A0A1B0GVI7 797 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 A0A1B0GW55 424 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 DNAJC9-AS1A6NH13 148 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 SNTNA6NMZ2 147 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 SULT1C4O75897 302 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 PLATP00750 562 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 SFTPBP07988 381 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 DUX4L2P0CJ85 424 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 DUX4L3P0CJ86 424 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 DUX4L4P0CJ87 422 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 DUX4L5P0CJ88 424 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 DUX4L6P0CJ89 424 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 DUX4L7P0CJ90 424 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 PRTN3P24158 256 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 GABRA2P47869 451 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 BPIFB3P59826 476 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 ATPAF1Q5TC12 328 aaPredicted RBP11.43□□□□□ -0.58
PNKP-228ENST00000637325 STUMQ69YW2 141 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 HAGHLQ6PII5 290 aaPredicted RBP11.43□□□□□ -0.58
PNKP-228ENST00000637325 DUX4L9Q6RFH8 374 aaPredicted RBP11.43□□□□□ -0.58
PNKP-228ENST00000637325 BRD3OSQ6XYD6 125 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 C9orf139Q6ZV77 190 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 FAM220AQ7Z4H9 259 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 CBR4Q8N4T8 237 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 UBE2FQ969M7 185 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 TMIGD2Q96BF3 282 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 MED30Q96HR3 178 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 HRASLS5Q96KN8 279 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 ZNF48Q96MX3 618 aaPredicted RBP11.43□□□□□ -0.58
PNKP-228ENST00000637325 WDFY2Q96P53 400 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 C9orf16Q9BUW7 83 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms