RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 FAM76BQ5HYJ3 339 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 WDR38Q5JTN6 314 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 CEP78Q5JTW2 689 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 Q71RC1 249 aaPredicted RBP6.92□□□□□ -1.3
PNKP-226ENST00000636840 DEFB108BQ8NET1 73 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 OR8B3Q8NGG8 313 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 OR5D14Q8NGL3 314 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 OR10Z1Q8NGY1 313 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 OR51F2Q8NH61 342 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 DVL3Q92997 716 aaPredicted RBP6.92□□□□□ -1.3
PNKP-226ENST00000636840 MSI2Q96DH6 328 aaKnown RBP6.92□□□□□ -1.3
PNKP-226ENST00000636840 ITPKCQ96DU7 683 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 NEIL1Q96FI4 390 aaPredicted RBP6.92□□□□□ -1.3
PNKP-226ENST00000636840 C1orf159Q96HA4 380 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 OR8B2Q96RD0 313 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 BEX2Q9BXY8 128 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 SHARPINQ9H0F6 387 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 RASSF4Q9H2L5 321 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 TMEM165Q9HC07 324 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 FRRS1LQ9P0K9 344 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 ERVK-18Q9QC07 812 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 DNAJB11Q9UBS4 358 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 LPAR3Q9UBY5 353 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 PSORS1C1Q9UIG5 152 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 BLOC1S6Q9UL45 172 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 RAB26Q9ULW5 256 aa6.92□□□□□ -1.3
PNKP-226ENST00000636840 RRP15Q9Y3B9 282 aaKnown RBP6.92□□□□□ -1.3
PNKP-226ENST00000636840 LOC107986453A0A1B0GWG9 222 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 ANKRD61A6NGH8 418 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 MAGEB3O15480 346 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 RRP9O43818 475 aaKnown RBP6.91□□□□□ -1.3
PNKP-226ENST00000636840 XPNPEP2O43895 674 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 CYB5AP00167 134 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 IGHV2-5P01817 119 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 MSMBP08118 114 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 LIMS3P0CW19 117 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 LIMS4P0CW20 117 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 RPS2P15880 293 aaKnown RBP6.91□□□□□ -1.3
PNKP-226ENST00000636840 MUC1P15941 1255 aaPredicted RBP6.91□□□□□ -1.3
PNKP-226ENST00000636840 ANOS1P23352 680 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 MYF6P23409 242 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 GATA3P23771 443 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 PMELP40967 661 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 ETV1P50549 477 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 GPM6AP51674 278 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 DVL1P1P54792 670 aaPredicted RBP6.91□□□□□ -1.3
PNKP-226ENST00000636840 ZNF154Q13106 437 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 ZMYND11Q15326 602 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 CNN3Q15417 329 aaKnown RBP6.91□□□□□ -1.3
PNKP-226ENST00000636840 CD276Q5ZPR3 534 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 DCDC5Q6ZRR9 648 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 Q6ZSR3 168 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 SERPINA12Q8IW75 414 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 RDH10Q8IZV5 341 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 PRSS35Q8N3Z0 413 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 SCCPDHQ8NBX0 429 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 OR13C3Q8NGS6 347 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 OR52N1Q8NH53 320 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 FBLIM1Q8WUP2 373 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 LRRC29Q8WV35 223 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 FGGYQ96C11 551 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 BORCS8Q96FH0 119 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 TMEM246Q9BRR3 403 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 ANKRD60Q9BZ19 345 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 ISG20L2Q9H9L3 353 aaKnown RBP6.91□□□□□ -1.3
PNKP-226ENST00000636840 GPR173Q9NS66 373 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 TMEM160Q9NX00 188 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 RASL12Q9NYN1 266 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 CDC42EP3Q9UKI2 254 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 DHDHQ9UQ10 334 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 LRCH1Q9Y2L9 728 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 POLDIP2Q9Y2S7 368 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 PCDHGB5Q9Y5G0 923 aa6.91□□□□□ -1.3
PNKP-226ENST00000636840 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.9□□□□□ -1.32e-7■■■□□ 15.6
PNKP-226ENST00000636840 YLPM1P49750 1951 aaKnown RBP6.9□□□□□ -1.3
PNKP-226ENST00000636840 FAM230AA0A1W2PPH8 454 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 OOEPA6NGQ2 149 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 A6NIN4 97 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 OR4C45A6NMZ5 311 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 C3orf80F5H4A9 247 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 H3BSH0 61 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 WNT9BO14905 357 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 PLPP2O43688 288 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 ZNF205O95201 554 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 WNT2P09544 360 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 ZNF16P17020 682 aaPredicted RBP6.9□□□□□ -1.3
PNKP-226ENST00000636840 GLRA1P23415 457 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 EEF1B2P24534 225 aaKnown RBP6.9□□□□□ -1.3
PNKP-226ENST00000636840 THBS2P35442 1172 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 KIR3DL2P43630 455 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 HAAOP46952 286 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 RBP2P50120 134 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 NPY4RP50391 375 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 RIPPLY3P57055 190 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 NANOS3P60323 173 aaKnown RBP6.9□□□□□ -1.3
PNKP-226ENST00000636840 GNB2P62879 340 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 SCGB2A2Q13296 93 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 CHRFAM7AQ494W8 412 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 ZNF404Q494X3 552 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 RBM48Q5RL73 367 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms