RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 GSX1Q9H4S2 264 aaPredicted RBP13.03□□□□□ -0.32
CLN6-211ENST00000635754 GPR173Q9NS66 373 aa13.03□□□□□ -0.32
CLN6-211ENST00000635754 BABAM2Q9NXR7 383 aa13.03□□□□□ -0.32
CLN6-211ENST00000635754 TLN2Q9Y4G6 2542 aa13.03□□□□□ -0.32
CLN6-211ENST00000635754 ANKRD61A6NGH8 418 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 LMX1BO60663 402 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 ZFPL1O95159 310 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 IGHV4-31P0DP07 118 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 ZNF20P17024 532 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 IL2RGP31785 369 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 CDK5R1Q15078 307 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 ZMYND11Q15326 602 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 TMEM42Q69YG0 159 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 XAF1Q6GPH4 301 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 MUC20Q8N307 709 aaPredicted RBP13.02□□□□□ -0.33
CLN6-211ENST00000635754 SPICQ8N5J4 248 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 OR13C3Q8NGS6 347 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 PP6455Q8WZ26 134 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 TECTBQ96PL2 329 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 PDCD1LG2Q9BQ51 273 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 TLNRD1Q9H1K6 362 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 RASSF4Q9H2L5 321 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 ERGIC3Q9Y282 383 aa13.02□□□□□ -0.33
CLN6-211ENST00000635754 ABCA1O95477 2261 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 CSPG4Q6UVK1 2322 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 ABCA2Q9BZC7 2435 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 MTORP42345 2549 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 PPIAL4EA0A075B759 164 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 ZNF732B4DXR9 585 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 PPIAL4DF5H284 164 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 CD5LO43866 347 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 GATBO75879 557 aaKnown RBP13.01□□□□□ -0.33
CLN6-211ENST00000635754 SERPINA3P01011 423 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 PPIAL4FP0DN26 164 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 WNT4P56705 351 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 TAS2R43P59537 309 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 SLC35A2P78381 396 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 KRTAP1-1Q07627 177 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 TMEM155Q4W5P6 130 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 FAM76BQ5HYJ3 339 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 DMRTC1Q5HYR2 192 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 CYB5R2Q6BCY4 276 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 ZNF826PQ6ZT77 177 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 LRRC28Q86X40 367 aaPredicted RBP13.01□□□□□ -0.33
CLN6-211ENST00000635754 OR10AC1Q8NH08 325 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 MND1Q9BWT6 205 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 CHST5Q9GZS9 411 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 FGF23Q9GZV9 251 aaPredicted RBP13.01□□□□□ -0.33
CLN6-211ENST00000635754 ZNF665Q9H7R5 613 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 UBAP1Q9NZ09 502 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 BLOC1S6Q9UL45 172 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 PCDHB10Q9UN67 800 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 SLC7A11Q9UPY5 501 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 PPIAL4AQ9Y536 164 aa13.01□□□□□ -0.33
CLN6-211ENST00000635754 CDIPTO14735 213 aa13□□□□□ -0.33
CLN6-211ENST00000635754 ZNF205O95201 554 aa13□□□□□ -0.33
CLN6-211ENST00000635754 FSTL3O95633 263 aa13□□□□□ -0.33
CLN6-211ENST00000635754 IGHV2-5P01817 119 aa13□□□□□ -0.33
CLN6-211ENST00000635754 CRHBPP24387 322 aa13□□□□□ -0.33
CLN6-211ENST00000635754 LMO4P61968 165 aa13□□□□□ -0.33
CLN6-211ENST00000635754 RBM48Q5RL73 367 aaKnown RBP13□□□□□ -0.33
CLN6-211ENST00000635754 RNLSQ5VYX0 342 aa13□□□□□ -0.33
CLN6-211ENST00000635754 WDR82Q6UXN9 313 aa13□□□□□ -0.33
CLN6-211ENST00000635754 C11orf53Q8IXP5 236 aa13□□□□□ -0.33
CLN6-211ENST00000635754 NANOGP1Q8N7R0 232 aa13□□□□□ -0.33
CLN6-211ENST00000635754 BOLLQ8N9W6 283 aaKnown RBP13□□□□□ -0.33
CLN6-211ENST00000635754 SCCPDHQ8NBX0 429 aa13□□□□□ -0.33
CLN6-211ENST00000635754 ZNF485Q8NCK3 441 aa13□□□□□ -0.33
CLN6-211ENST00000635754 OR51A4Q8NGJ6 313 aa13□□□□□ -0.33
CLN6-211ENST00000635754 LRRC29Q8WV35 223 aa13□□□□□ -0.33
CLN6-211ENST00000635754 TSEN15Q8WW01 171 aaKnown RBP13□□□□□ -0.33
CLN6-211ENST00000635754 RPL3LQ92901 407 aaKnown RBP13□□□□□ -0.33
CLN6-211ENST00000635754 FGGYQ96C11 551 aa13□□□□□ -0.33
CLN6-211ENST00000635754 SMIM19Q96E16 107 aa13□□□□□ -0.33
CLN6-211ENST00000635754 ADAT3Q96EY9 351 aaPredicted RBP13□□□□□ -0.33
CLN6-211ENST00000635754 CDCA4Q9BXL8 241 aa13□□□□□ -0.33
CLN6-211ENST00000635754 DUSP21Q9H596 190 aa13□□□□□ -0.33
CLN6-211ENST00000635754 PAK1IP1Q9NWT1 392 aaPredicted RBP13□□□□□ -0.33
CLN6-211ENST00000635754 ERVK-18Q9QC07 812 aa13□□□□□ -0.33
CLN6-211ENST00000635754 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13□□□□□ -0.335e-18■■□□□ 13.9
CLN6-211ENST00000635754 OGG1O15527 345 aa12.99□□□□□ -0.33
CLN6-211ENST00000635754 DENRO43583 198 aaKnown RBP12.99□□□□□ -0.33
CLN6-211ENST00000635754 RGS10O43665 173 aa12.99□□□□□ -0.33
CLN6-211ENST00000635754 LALBAP00709 142 aa12.99□□□□□ -0.33
CLN6-211ENST00000635754 ZNF16P17020 682 aaPredicted RBP12.99□□□□□ -0.33
CLN6-211ENST00000635754 CNN3Q15417 329 aaKnown RBP12.99□□□□□ -0.33
CLN6-211ENST00000635754 FAM201AQ5SY85 155 aa12.99□□□□□ -0.33
CLN6-211ENST00000635754 GCSAMQ8N6F7 178 aa12.99□□□□□ -0.33
CLN6-211ENST00000635754 RPS4Y2Q8TD47 263 aa12.99□□□□□ -0.33
CLN6-211ENST00000635754 MSI2Q96DH6 328 aaKnown RBP12.99□□□□□ -0.33
CLN6-211ENST00000635754 C1orf159Q96HA4 380 aa12.99□□□□□ -0.33
CLN6-211ENST00000635754 OR51I2Q9H344 312 aa12.99□□□□□ -0.33
CLN6-211ENST00000635754 DHDHQ9UQ10 334 aa12.99□□□□□ -0.33
CLN6-211ENST00000635754 PCDHGB5Q9Y5G0 923 aa12.99□□□□□ -0.33
CLN6-211ENST00000635754 B4DSR2 109 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 CD80P33681 288 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 CFHR2P36980 270 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 UBE2V2Q15819 145 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 KCNJ8Q15842 424 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 ZNF404Q494X3 552 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms