RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PRF1P14222 555 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 INPP1P49441 399 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 CCR9P51686 369 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 RPS23P62266 143 aaKnown RBP12.42□□□□□ -0.42
LINC00339-208ENST00000634934 NKX6-1P78426 367 aaPredicted RBP12.42□□□□□ -0.42
LINC00339-208ENST00000634934 HLXQ14774 488 aaPredicted RBP12.42□□□□□ -0.42
LINC00339-208ENST00000634934 UNQ9370/PRO34162Q6UXP9 181 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 ZNF704Q6ZNC4 412 aaPredicted RBP12.42□□□□□ -0.42
LINC00339-208ENST00000634934 OR5AK2Q8NH90 309 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 SLC25A40Q8TBP6 338 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 OR51E1Q8TCB6 317 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 DEDD2Q8WXF8 326 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 NEUROG1Q92886 237 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 SGK3Q96BR1 496 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 REEP6Q96HR9 211 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 PDCD1LG2Q9BQ51 273 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 OR2J1Q9GZK6 312 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 COMMD4Q9H0A8 199 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 FZR1Q9UM11 496 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 NUBP2Q9Y5Y2 271 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 TMEM212A6NML5 194 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 OR4C45A6NMZ5 311 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 ZFPL1O95159 310 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 DHFRP00374 187 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 UCHL1P09936 223 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 THBS4P35443 961 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 GLRXP35754 106 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 FABP6P51161 128 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 CAV3P56539 151 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 PRSS12P56730 875 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 GNG2P59768 71 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 ZNF92Q03936 586 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 DYRK1AQ13627 763 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 GPR176Q14439 515 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 RGS7BPQ6MZT1 257 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-208ENST00000634934 MRPL21Q7Z2W9 205 aaKnown RBP12.41□□□□□ -0.42
LINC00339-208ENST00000634934 NUP37Q8NFH4 326 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 SMIM19Q96E16 107 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 FYTTD1Q96QD9 318 aaKnown RBP12.41□□□□□ -0.42
LINC00339-208ENST00000634934 TMEM204Q9BSN7 226 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 THAP7Q9BT49 309 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-208ENST00000634934 GPR84Q9NQS5 396 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 CA10Q9NS85 328 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 HRNRQ86YZ3 2850 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-208ENST00000634934 TACC2O95359 2948 aa12.41□□□□□ -0.42
LINC00339-208ENST00000634934 A0A0U1RQV5 110 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 A0A1B0GVI7 797 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 UBCP0CG48 685 aaKnown RBP12.4□□□□□ -0.42
LINC00339-208ENST00000634934 GCH1P30793 250 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 MNDAP41218 407 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 GK2Q14410 553 aaPredicted RBP12.4□□□□□ -0.42
LINC00339-208ENST00000634934 ZNF718Q3SXZ3 478 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 CD276Q5ZPR3 534 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 PGAP1Q75T13 922 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 C1orf174Q8IYL3 243 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 ZNF295-AS1Q8N0V1 137 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 OR4M1Q8NGD0 313 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 TMEM171Q8WVE6 324 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 GHSRQ92847 366 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 CMBLQ96DG6 245 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 MARS2Q96GW9 593 aaKnown RBP12.4□□□□□ -0.42
LINC00339-208ENST00000634934 FAM71F1Q96KD3 344 aaPredicted RBP12.4□□□□□ -0.42
LINC00339-208ENST00000634934 LYZL4Q96KX0 146 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 RGCCQ9H4X1 137 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 PLEKHA1Q9HB21 404 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 NLKQ9UBE8 527 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 CACNG2Q9Y698 323 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 ITPR2Q14571 2701 aa12.4□□□□□ -0.42
LINC00339-208ENST00000634934 A0A0G2JMP0 313 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 A0A0X1KG70 313 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 LOC107986453A0A1B0GWG9 222 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 VSTM5A8MXK1 200 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 E7EQL1 145 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 SYT7O43581 403 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 ZNF780AO75290 641 aaPredicted RBP12.39□□□□□ -0.43
LINC00339-208ENST00000634934 RAB3BP20337 219 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 TUBG1P23258 451 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 MPV17P39210 176 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 SCAND1P57086 179 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 ZNF672Q499Z4 452 aaPredicted RBP12.39□□□□□ -0.43
LINC00339-208ENST00000634934 IDNKQ5T6J7 187 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 TMEM244Q5VVB8 128 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 OR4M2Q8NGB6 313 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 KLF14Q8TD94 323 aaPredicted RBP12.39□□□□□ -0.43
LINC00339-208ENST00000634934 UBASH3BQ8TF42 649 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 SOX7Q9BT81 388 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 DPAGT1Q9H3H5 408 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 GHITMQ9H3K2 345 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 TUBG2Q9NRH3 451 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 CISD1Q9NZ45 108 aaKnown RBP12.39□□□□□ -0.43
LINC00339-208ENST00000634934 DUSP13Q9UII6 198 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 ZNF391Q9UJN7 358 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 SPATA2Q9UM82 520 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 ZNF281Q9Y2X9 895 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 ABCA12Q86UK0 2595 aa12.39□□□□□ -0.43
LINC00339-208ENST00000634934 ABCA4P78363 2273 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 A0A1B0GTI1 187 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 GGT3PA6NGU5 568 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 SULT1B1O43704 296 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 NCR1O76036 304 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms