RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 RGP1Q92546 391 aaPredicted RBP12.44□□□□□ -0.42
PNKP-221ENST00000627317 FAM168AQ92567 244 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 ADAT3Q96EY9 351 aaPredicted RBP12.44□□□□□ -0.42
PNKP-221ENST00000627317 CHST5Q9GZS9 411 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 ZNF275Q9NSD4 429 aaPredicted RBP12.44□□□□□ -0.42
PNKP-221ENST00000627317 PPP1R3CQ9UQK1 317 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 CR1P17927 2039 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 CHD3Q12873 2000 aaKnown RBP12.44□□□□□ -0.42
PNKP-221ENST00000627317 SONP18583 2426 aaKnown RBP12.43□□□□□ -0.42
PNKP-221ENST00000627317 JMJD1CQ15652 2540 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 OR5B21A6NL26 309 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 A6NLC8 198 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 PLPP2O43688 288 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 CD2P06729 351 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 GRPP07492 148 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 OCM2P0CE71 109 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 OCMP0CE72 109 aaPredicted RBP12.43□□□□□ -0.42
PNKP-221ENST00000627317 SLC25A16P16260 332 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 CRYBB2P43320 205 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 EMX1Q04741 257 aaPredicted RBP12.43□□□□□ -0.42
PNKP-221ENST00000627317 LOXL1Q08397 574 aaPredicted RBP12.43□□□□□ -0.42
PNKP-221ENST00000627317 MLLT11Q13015 90 aaPredicted RBP12.43□□□□□ -0.42
PNKP-221ENST00000627317 MAB21L1Q13394 359 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 CEACAM21Q3KPI0 293 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 YIF1BQ5BJH7 314 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 TMEM42Q69YG0 159 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 KRT74Q7RTS7 529 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 MOGAT3Q86VF5 341 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 OR11L1Q8NGX0 322 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 OR5P3Q8WZ94 311 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 CCL17Q92583 94 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 FCGR1BQ92637 280 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 YIPF5Q969M3 257 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 RNF170Q96K19 258 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 PGLYRP3Q96LB9 341 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 TECTBQ96PL2 329 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 MGLLQ99685 303 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 PIMREGQ9BSJ6 248 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 CHODLQ9H9P2 273 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 FN3KRPQ9HA64 309 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 ISYNA1Q9NPH2 558 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 UFSP2Q9NUQ7 469 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 TREM2Q9NZC2 230 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 SLC7A11Q9UPY5 501 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 CACNG2Q9Y698 323 aa12.43□□□□□ -0.42
PNKP-221ENST00000627317 TMEM210A6NLX4 147 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 CLDN25C9JDP6 229 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 INAFM1C9JVW0 142 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 IFNL4K9M1U5 179 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 NDUFS8O00217 210 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 RP2O75695 350 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 CD1AP06126 327 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 IRF2P14316 349 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 COL8A2P25067 703 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 PSMB9P28065 219 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 GATA4P43694 442 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 GPM6AP51674 278 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 GNG3P63215 75 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 CNN3Q15417 329 aaKnown RBP12.42□□□□□ -0.42
PNKP-221ENST00000627317 DMRTC1Q5HYR2 192 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 LIPKQ5VXJ0 399 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 OR5A2Q8NGI9 324 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 OR13C5Q8NGS8 318 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 NPRL2Q8WTW4 380 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 HPS1Q92902 700 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 ERGIC1Q969X5 290 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 OPALINQ96PE5 141 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 TMED9Q9BVK6 235 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 ZNF696Q9H7X3 374 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 VCX3AQ9NNX9 186 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 GCM1Q9NP62 436 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 ABCA2Q9BZC7 2435 aa12.42□□□□□ -0.42
PNKP-221ENST00000627317 TANC2Q9HCD6 1990 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 A0A087WXM4 84 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 LOC100289279A0A1B0GTE1 492 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 hCG_1807616A0A1W2PRN6 198 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 LRRC30A6NM36 301 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 ZNF732B4DXR9 585 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 PPIHO43447 177 aaKnown RBP12.41□□□□□ -0.42
PNKP-221ENST00000627317 CD5LO43866 347 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 PTBP3O95758 552 aaKnown RBP12.41□□□□□ -0.42
PNKP-221ENST00000627317 THBS2P35442 1172 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 ZNF154Q13106 437 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 GPR50Q13585 617 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 TPBGQ13641 420 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 MPPED2Q15777 294 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 TMEM249Q2WGJ8 235 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 Q499Y3 187 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 UBE2UQ5VVX9 321 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 UTS2BQ765I0 119 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 PEG10Q86TG7 708 aaKnown RBP12.41□□□□□ -0.42
PNKP-221ENST00000627317 WDR86Q86TI4 376 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 MS4A15Q8N5U1 240 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 TSPAN14Q8NG11 270 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 OR1M1Q8NGA1 313 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 OR13C9Q8NGT0 318 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 ZNF420Q8TAQ5 688 aaPredicted RBP12.41□□□□□ -0.42
PNKP-221ENST00000627317 TRMT10AQ8TBZ6 339 aaKnown RBP12.41□□□□□ -0.42
PNKP-221ENST00000627317 THRSPQ92748 146 aa12.41□□□□□ -0.42
PNKP-221ENST00000627317 TMEM106AQ96A25 262 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms