RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 OR51B6Q9H340 312 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 CYSLTR2Q9NS75 346 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 CGGBP1Q9UFW8 167 aaPredicted RBP10.75□□□□□ -0.69
PNKP-217ENST00000625216 GSTK1Q9Y2Q3 226 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 N6AMT1Q9Y5N5 214 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 CHD3Q12873 2000 aaKnown RBP10.74□□□□□ -0.69
PNKP-217ENST00000625216 A0A1W2PPK0 400 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 SMIM30A4D0T7 59 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 LRP5LA4QPB2 252 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 ZNF879B4DU55 563 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 CDRT1O95170 752 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 IGLV3-1P01715 115 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 ISG15P05161 165 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 CALRP27797 417 aaKnown RBP10.74□□□□□ -0.69
PNKP-217ENST00000625216 TPTEP56180 551 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 PPP1CBP62140 327 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 SNAI3Q3KNW1 292 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 TMEM244Q5VVB8 128 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 ZNF101Q8IZC7 436 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 OR51E1Q8TCB6 317 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 KLF14Q8TD94 323 aaPredicted RBP10.74□□□□□ -0.69
PNKP-217ENST00000625216 TSEN15Q8WW01 171 aaKnown RBP10.74□□□□□ -0.69
PNKP-217ENST00000625216 LYZL4Q96KX0 146 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 MDFIQ99750 246 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 NOX4Q9NPH5 578 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 DECR2Q9NUI1 292 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 TBCCD1Q9NVR7 557 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 HHLA2Q9UM44 414 aa10.74□□□□□ -0.69
PNKP-217ENST00000625216 PLSCR5A0PG75 271 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 B4DSR2 109 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 TBX1O43435 398 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 RP2O75695 350 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 NCR1O76036 304 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 APOC1P02654 83 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 ADH4P08319 380 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 OCM2P0CE71 109 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 CCL1P22362 96 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 SDC2P34741 201 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 RPS19P39019 145 aaKnown RBP10.73□□□□□ -0.69
PNKP-217ENST00000625216 MTNR1BP49286 362 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 ZNF81P51508 661 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 MMP15P51511 669 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 CCL8P80075 99 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 MXD1Q05195 221 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 GFOD2Q3B7J2 385 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 ALKBH6Q3KRA9 238 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 FAM120AOSQ5T036 256 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 ASPHD2Q6ICH7 369 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 SPATA3Q8NHX4 192 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 SLC25A40Q8TBP6 338 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 YIPF5Q969M3 257 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 DIRC2Q96SL1 478 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 BARHL1Q9BZE3 327 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 OR2J1Q9GZK6 312 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 GPR84Q9NQS5 396 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 ZNF275Q9NSD4 429 aaPredicted RBP10.73□□□□□ -0.69
PNKP-217ENST00000625216 SNTG1Q9NSN8 517 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 CCDC59Q9P031 241 aaKnown RBP10.73□□□□□ -0.69
PNKP-217ENST00000625216 COL6A5A8TX70 2615 aa10.73□□□□□ -0.69
PNKP-217ENST00000625216 TRAV8-7A0A075B6U6 113 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 A0A0G2JK05 382 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 IGHV1-69-2A0A0G2JMI3 117 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 A0A0U1RQV5 110 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 A0A1B0GVI7 797 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 PPIHO43447 177 aaKnown RBP10.72□□□□□ -0.69
PNKP-217ENST00000625216 NGFP01138 241 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 IL1AP01583 271 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 LCATP04180 440 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 SRD5A1P18405 259 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 MYL9P24844 172 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 MAPK3P27361 379 aaPredicted RBP10.72□□□□□ -0.69
PNKP-217ENST00000625216 MPV17P39210 176 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 DVL1P1P54792 670 aaPredicted RBP10.72□□□□□ -0.69
PNKP-217ENST00000625216 HSD17B12Q53GQ0 312 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 GLYATL3Q5SZD4 288 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 COLCA1Q6ZS62 124 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 NR2C2APQ86WQ0 139 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 OR13C3Q8NGS6 347 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 PHYHIPQ92561 330 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 TMEM106AQ96A25 262 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 ELMOD3Q96FG2 381 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 FAM71F1Q96KD3 344 aaPredicted RBP10.72□□□□□ -0.69
PNKP-217ENST00000625216 C1QTNF5Q9BXJ0 243 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 SLIRPQ9GZT3 109 aaKnown RBP10.72□□□□□ -0.69
PNKP-217ENST00000625216 EGLN1Q9GZT9 426 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 OR10A2Q9H208 303 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 ZDHHC8Q9ULC8 765 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 DHDHQ9UQ10 334 aa10.72□□□□□ -0.69
PNKP-217ENST00000625216 FBN1P35555 2871 aaKnown RBP10.71□□□□□ -0.69
PNKP-217ENST00000625216 TRAV1-2A0A0B4J238 106 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 J3QW42 95 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 TPD52L2O43399 206 aaKnown RBP10.71□□□□□ -0.69
PNKP-217ENST00000625216 SYT7O43581 403 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 ARL6IP5O75915 188 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 FSTP19883 344 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 IL2RGP31785 369 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 CAV3P56539 151 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 HNRNPA0Q13151 305 aaKnown RBP10.71□□□□□ -0.69
PNKP-217ENST00000625216 CR1LQ2VPA4 569 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 HFEQ30201 348 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms