RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ROM1Q03395 351 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 TSPO2Q5TGU0 170 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 MAMDC2Q7Z304 686 aaPredicted RBP13.45□□□□□ -0.26
PMS1-221ENST00000624204 MRPL24Q96A35 216 aaKnown RBP13.45□□□□□ -0.26
PMS1-221ENST00000624204 SLC22A18Q96BI1 424 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 SNX22Q96L94 193 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 FOXQ1Q9C009 403 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 C8orf33Q9H7E9 229 aaPredicted RBP13.45□□□□□ -0.26
PMS1-221ENST00000624204 FGF22Q9HCT0 170 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 POLR1DQ9Y2S0 133 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 LOC390937A0A1W2PQ73 354 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 ZNF217O75362 1048 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 RAD51DO75771 328 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 BPNT1O95861 308 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 CTNNB1P35222 781 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 SNU13P55769 128 aaKnown RBP13.45□□□□□ -0.26
PMS1-221ENST00000624204 FXYD4P59646 89 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 IL15RAQ13261 267 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 C2orf88Q9BSF0 95 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 KIR3DX1Q9H7L2 352 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 RHBDD3Q9Y3P4 386 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 HCRTR1O43613 425 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 CRTAPO75718 401 aaPredicted RBP13.44□□□□□ -0.26
PMS1-221ENST00000624204 CNOT4O95628 575 aaKnown RBP13.44□□□□□ -0.26
PMS1-221ENST00000624204 H2BFMP0C1H6 154 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 BCKDHBP21953 392 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 FCARP24071 287 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 IL2RGP31785 369 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 PTGER4P35408 488 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 GLO1Q04760 184 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 FAM71F1Q96KD3 344 aaPredicted RBP13.44□□□□□ -0.26
PMS1-221ENST00000624204 WFIKKN1Q96NZ8 548 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 ADOQ96SZ5 270 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 NUDT22Q9BRQ3 303 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 BCO1Q9HAY6 547 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 WFDC1Q9HC57 220 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 HSF4Q9ULV5 492 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 H0YIG0 161 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 MASP2O00187 686 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 WISP1O95388 367 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 PTBP3O95758 552 aaKnown RBP13.44□□□□□ -0.26
PMS1-221ENST00000624204 SEC11BP0C7V7 166 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 HIST1H1DP16402 221 aaKnown RBP13.44□□□□□ -0.26
PMS1-221ENST00000624204 RNF4P78317 190 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 CCL20P78556 96 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 VAX1Q5SQQ9 334 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 AADACL3Q5VUY0 350 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 TCEAL6Q6IPX3 200 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 FRZBQ92765 325 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 LPAR5Q9H1C0 372 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 HEBP2Q9Y5Z4 205 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 A0A0A6YYD4 124 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 SCDO00767 359 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 CSF2RAP15509 400 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 LILRA6Q6PI73 481 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 HPSE2Q8WWQ2 592 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 RSC1A1Q92681 617 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 YPEL4Q96NS1 127 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 G6PC2Q9NQR9 355 aa13.44□□□□□ -0.26
PMS1-221ENST00000624204 VSX1Q9NZR4 365 aaPredicted RBP13.44□□□□□ -0.26
PMS1-221ENST00000624204 MRPS28Q9Y2Q9 187 aaKnown RBP13.44□□□□□ -0.26
PMS1-221ENST00000624204 BCAT2O15382 392 aaPredicted RBP13.43□□□□□ -0.26
PMS1-221ENST00000624204 MMP7P09237 267 aaPredicted RBP13.43□□□□□ -0.26
PMS1-221ENST00000624204 CHRFAM7AQ494W8 412 aa13.43□□□□□ -0.26
PMS1-221ENST00000624204 AGBL4Q5VU57 503 aa13.43□□□□□ -0.26
PMS1-221ENST00000624204 ZFP62Q8NB50 900 aaPredicted RBP13.43□□□□□ -0.26
PMS1-221ENST00000624204 GPBAR1Q8TDU6 330 aa13.43□□□□□ -0.26
PMS1-221ENST00000624204 NEU1Q99519 415 aa13.43□□□□□ -0.26
PMS1-221ENST00000624204 TMEM59Q9BXS4 323 aa13.43□□□□□ -0.26
PMS1-221ENST00000624204 MAP1BP46821 2468 aaKnown RBP13.43□□□□□ -0.26
PMS1-221ENST00000624204 HCKP08631 526 aa13.43□□□□□ -0.26
PMS1-221ENST00000624204 HSD11B1P28845 292 aa13.43□□□□□ -0.26
PMS1-221ENST00000624204 RPL27P61353 136 aaKnown RBP13.43□□□□□ -0.26
PMS1-221ENST00000624204 NHLH2Q02577 135 aa13.43□□□□□ -0.26
PMS1-221ENST00000624204 HDAC8Q9BY41 377 aa13.43□□□□□ -0.26
PMS1-221ENST00000624204 KCNIP3Q9Y2W7 256 aa13.43□□□□□ -0.26
PMS1-221ENST00000624204 CACNA1DQ01668 2161 aa13.43□□□□□ -0.26
PMS1-221ENST00000624204 CEP290O15078 2479 aa13.43□□□□□ -0.26
PMS1-221ENST00000624204 ARHGEF17Q96PE2 2063 aaPredicted RBP13.42□□□□□ -0.26
PMS1-221ENST00000624204 GEMIN2O14893 280 aaKnown RBP13.42□□□□□ -0.26
PMS1-221ENST00000624204 SCGNO76038 276 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 THEGLP0DJG4 465 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 COX5BP10606 129 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 RPS2P15880 293 aaKnown RBP13.42□□□□□ -0.26
PMS1-221ENST00000624204 ZNF20P17024 532 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 NKAIN1Q4KMZ8 207 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 C2orf27AQ580R0 203 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 ZNF429Q86V71 674 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 SULF2Q8IWU5 870 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 SGPP2Q8IWX5 399 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 ZNF440Q8IYI8 595 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 EMC6Q9BV81 110 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 OR8D2Q9GZM6 311 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 CYP8B1Q9UNU6 501 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 LIPGQ9Y5X9 500 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 BRWD1Q9NSI6 2320 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 IGLV1-36A0A0B4J1U3 117 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 FIGNL2A6NMB9 653 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 MAS1LP35410 378 aa13.42□□□□□ -0.26
PMS1-221ENST00000624204 QRFPP83859 136 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms