RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CD1AP06126 327 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 ZNF20P17024 532 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 TGFBR2P37173 567 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 ZNF154Q13106 437 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 Q499Y3 187 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 ACSM3Q53FZ2 586 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 ZMAT1Q5H9K5 638 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 FAM201AQ5SY85 155 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 PARP16Q8N5Y8 322 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 NINJ1Q92982 152 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 RNF170Q96K19 258 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 DERL3Q96Q80 235 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 NOX4Q9NPH5 578 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 IL19Q9UHD0 177 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 ABCA1O95477 2261 aa11.52□□□□□ -0.57
NEK3-210ENST00000620675 TRBV5-7A0A0A0MS05 114 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 ZNF879B4DU55 563 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 ZNF732B4DXR9 585 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 RP2O75695 350 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 ZNF205O95201 554 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 CD200P41217 278 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 GPR50Q13585 617 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 CARTPTQ16568 116 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 PCGF3Q3KNV8 242 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 CEACAM21Q3KPI0 293 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 ZBTB37Q5TC79 503 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 FTMTQ8N4E7 242 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 FCGR1BQ92637 280 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 RPL3LQ92901 407 aaKnown RBP11.51□□□□□ -0.57
NEK3-210ENST00000620675 CXXC4Q9H2H0 198 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 METTL17Q9H7H0 456 aaPredicted RBP11.51□□□□□ -0.57
NEK3-210ENST00000620675 NDUFB11Q9NX14 153 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 FAM230AA0A1W2PPH8 454 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 ANXA2P2A6NMY6 339 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 UNQ9370/PRO34162Q6UXP9 181 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 ANGPTL5Q86XS5 388 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 CALHM1Q8IU99 346 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 BATF2Q8N1L9 274 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 C19orf18Q8NEA5 215 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 OR1M1Q8NGA1 313 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 NEU4Q8WWR8 484 aaPredicted RBP11.51□□□□□ -0.57
NEK3-210ENST00000620675 CCL17Q92583 94 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 RFT1Q96AA3 541 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 SLC22A4Q9H015 551 aa11.51□□□□□ -0.57
NEK3-210ENST00000620675 IGHV1-69-2A0A0G2JMI3 117 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 PQLC2LA1A4F0 135 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 GABRPO00591 440 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 RHBDL1O75783 438 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 PTBP3O95758 552 aaKnown RBP11.5□□□□□ -0.57
NEK3-210ENST00000620675 CYB5R3P00387 301 aaPredicted RBP11.5□□□□□ -0.57
NEK3-210ENST00000620675 ZNF12P17014 697 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 TNFSF4P23510 183 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 GABRA5P31644 462 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 CRYBB2P43320 205 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 ART1P52961 327 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 ZNF529Q6P280 563 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 CEACAM19Q7Z692 300 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 PP6455Q8WZ26 134 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 DIRC2Q96SL1 478 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 OR51E2Q9H255 320 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 ZCCHC4Q9H5U6 513 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 RNF167Q9H6Y7 350 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 PPP1R3CQ9UQK1 317 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 MALRD1Q5VYJ5 2156 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 SHISA3A0PJX4 238 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 CCRL2O00421 344 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 CDIPTO14735 213 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 PLATP00750 562 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 TFAP2AP05549 437 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 JUNBP17275 347 aaPredicted RBP11.5□□□□□ -0.57
NEK3-210ENST00000620675 IGFBP3P17936 291 aaPredicted RBP11.5□□□□□ -0.57
NEK3-210ENST00000620675 ATF1P18846 271 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 AZGP1P25311 298 aaKnown RBP11.5□□□□□ -0.57
NEK3-210ENST00000620675 TESK1Q15569 626 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 FAM76BQ5HYJ3 339 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 Q5PR19 223 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 UTS2BQ765I0 119 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 SERPINA12Q8IW75 414 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 MS4A15Q8N5U1 240 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 SCCPDHQ8NBX0 429 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 CCDC54Q8NEL0 328 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 WFDC11Q8NEX6 87 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 SEH1LQ96EE3 360 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 MICU1Q9BPX6 476 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 RTL8AQ9BWD3 113 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 EGLN1Q9GZT9 426 aa11.5□□□□□ -0.57
NEK3-210ENST00000620675 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.49□□□□□ -0.575e-7■■■■□ 23.5
NEK3-210ENST00000620675 TEP1Q99973 2627 aaKnown RBP11.49□□□□□ -0.57
NEK3-210ENST00000620675 IGHV4-30-2A0A087WSY4 118 aa11.49□□□□□ -0.57
NEK3-210ENST00000620675 A6NLC8 198 aa11.49□□□□□ -0.57
NEK3-210ENST00000620675 WNT9BO14905 357 aa11.49□□□□□ -0.57
NEK3-210ENST00000620675 SYNGR1O43759 233 aa11.49□□□□□ -0.57
NEK3-210ENST00000620675 GPX5O75715 221 aa11.49□□□□□ -0.57
NEK3-210ENST00000620675 GATA4P43694 442 aa11.49□□□□□ -0.57
NEK3-210ENST00000620675 SRP9P49458 86 aaKnown RBP11.49□□□□□ -0.57
NEK3-210ENST00000620675 GMFBP60983 142 aa11.49□□□□□ -0.57
NEK3-210ENST00000620675 DNM1P46Q6ZS02 220 aa11.49□□□□□ -0.57
NEK3-210ENST00000620675 OR52N4Q8NGI2 321 aa11.49□□□□□ -0.57
NEK3-210ENST00000620675 OR5A2Q8NGI9 324 aa11.49□□□□□ -0.57
NEK3-210ENST00000620675 C10orf35Q96D05 121 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms