RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SOX6P35712 828 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 ZNF93P35789 620 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-209ENST00000620393 RBP2P50120 134 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 MMP15P51511 669 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 ATP1B3P54709 279 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 MTCP1P56278 107 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 HNRNPA0Q13151 305 aaKnown RBP6.84□□□□□ -1.31
CPNE3-209ENST00000620393 KISS1Q15726 138 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 EFNB3Q15768 340 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 MST1LQ2TV78 715 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 FAM76BQ5HYJ3 339 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 DMRTC1Q5HYR2 192 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 C1orf100Q5SVJ3 147 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 DDI2Q5TDH0 399 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 PLCXD3Q63HM9 321 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 FAM166AQ6J272 317 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 SFXN4Q6P4A7 337 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 Q6ZR03 302 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 LHFPL2Q6ZUX7 228 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 NKAIN3Q8N8D7 197 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 RNF170Q96K19 258 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 MICU1Q9BPX6 476 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 UQCC2Q9BRT2 126 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 DCUN1D5Q9BTE7 237 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 BARHL1Q9BZE3 327 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 FGF23Q9GZV9 251 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-209ENST00000620393 NXF2Q9GZY0 626 aaKnown RBP6.84□□□□□ -1.31
CPNE3-209ENST00000620393 CYSLTR2Q9NS75 346 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 CCDC59Q9P031 241 aaKnown RBP6.84□□□□□ -1.31
CPNE3-209ENST00000620393 MYEF2Q9P2K5 600 aaKnown RBP6.84□□□□□ -1.31
CPNE3-209ENST00000620393 PLEKHB1Q9UF11 243 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-209ENST00000620393 CGGBP1Q9UFW8 167 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-209ENST00000620393 GPR160Q9UJ42 338 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 NOP16Q9Y3C1 178 aaKnown RBP6.84□□□□□ -1.31
CPNE3-209ENST00000620393 ADGRG4Q8IZF6 3080 aa6.84□□□□□ -1.31
CPNE3-209ENST00000620393 A0A075B6Q4 140 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-209ENST00000620393 FAM230AA0A1W2PPH8 454 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 PLSCR5A0PG75 271 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 PQLC2LA1A4F0 135 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 OR5B21A6NL26 309 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 ZNF732B4DXR9 585 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 H0YL77 283 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 AIPO00170 330 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 SLC17A2O00624 439 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 MLNRO43193 412 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 CFPP27918 469 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 RANBP1P43487 201 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 GNG3P63215 75 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 MZT1Q08AG7 82 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 DYNC1I2Q13409 638 aaKnown RBP6.83□□□□□ -1.32
CPNE3-209ENST00000620393 RIN1Q13671 783 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 OR8G1Q15617 311 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 SWI5Q1ZZU3 235 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 IDNKQ5T6J7 187 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 CRIP3Q6Q6R5 217 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 RNF144BQ7Z419 303 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 ANGPTL5Q86XS5 388 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 FBXL14Q8N1E6 418 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 MUC15Q8N387 334 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 JAGN1Q8N5M9 183 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 OR8S1Q8NH09 359 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 TRMT10AQ8TBZ6 339 aaKnown RBP6.83□□□□□ -1.32
CPNE3-209ENST00000620393 NPRL2Q8WTW4 380 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 HPSE2Q8WWQ2 592 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 SLC25A28Q96A46 364 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 BORCS8Q96FH0 119 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 SORCS2Q96PQ0 1159 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 SPACA5Q96QH8 159 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 SLIRPQ9GZT3 109 aaKnown RBP6.83□□□□□ -1.32
CPNE3-209ENST00000620393 CXXC4Q9H2H0 198 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 METTL17Q9H7H0 456 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-209ENST00000620393 CNTD2Q9H8S5 307 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 MSL2Q9HCI7 577 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 ABRACLQ9P1F3 81 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 STEAP1Q9UHE8 339 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 A3GALT2U3KPV4 340 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 PMF1-BGLAPU3KQ54 211 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 DOPEY1Q5JWR5 2465 aa6.83□□□□□ -1.32
CPNE3-209ENST00000620393 SPTAN1Q13813 2472 aaKnown RBP6.82□□□□□ -1.32
CPNE3-209ENST00000620393 IGKV1-27A0A075B6S5 117 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 LOC100289279A0A1B0GTE1 492 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 A0A1W2PPR1 153 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 A1L4Q6 167 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 ZSCAN5BA6NJL1 495 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 TMEM210A6NLX4 147 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 HS3ST1O14792 307 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 SPRY3O43610 288 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 CTAG2O75638 210 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 ADH4P08319 380 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 CALCBP10092 127 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 SLC2A2P11168 524 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-209ENST00000620393 COX6B1P14854 86 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 HTR2CP28335 458 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 THBS2P35442 1172 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 PTGFRP43088 359 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 ALDH3B1P43353 468 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 ZNF81P51508 661 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 GPM6AP51674 278 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 PDZK1IP1Q13113 114 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms