RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 ICMTO60725 284 aa18.69■□□□□ 0.58
SGMS1-210ENST00000619438 IL5P05113 134 aa18.69■□□□□ 0.58
SGMS1-210ENST00000619438 ERCC1P07992 297 aaPredicted RBP18.69■□□□□ 0.58
SGMS1-210ENST00000619438 ANXA3P12429 323 aa18.69■□□□□ 0.58
SGMS1-210ENST00000619438 PCGF3Q3KNV8 242 aa18.69■□□□□ 0.58
SGMS1-210ENST00000619438 SLC22A24Q8N4F4 322 aa18.69■□□□□ 0.58
SGMS1-210ENST00000619438 ADAT3Q96EY9 351 aaPredicted RBP18.69■□□□□ 0.58
SGMS1-210ENST00000619438 ZNF385AQ96PM9 386 aaKnown RBP18.69■□□□□ 0.58
SGMS1-210ENST00000619438 GON7Q9BXV9 100 aa18.69■□□□□ 0.58
SGMS1-210ENST00000619438 NOX3Q9HBY0 568 aa18.69■□□□□ 0.58
SGMS1-210ENST00000619438 RER1O15258 196 aa18.68■□□□□ 0.58
SGMS1-210ENST00000619438 RAB3AP20336 220 aa18.68■□□□□ 0.58
SGMS1-210ENST00000619438 ZNF121P58317 390 aaPredicted RBP18.68■□□□□ 0.58
SGMS1-210ENST00000619438 KRTAP10-9P60411 292 aa18.68■□□□□ 0.58
SGMS1-210ENST00000619438 ACTBP60709 375 aa18.68■□□□□ 0.58
SGMS1-210ENST00000619438 ACTG1P63261 375 aa18.68■□□□□ 0.58
SGMS1-210ENST00000619438 RAB12Q6IQ22 244 aa18.68■□□□□ 0.58
SGMS1-210ENST00000619438 SEZ6L2Q6UXD5 910 aa18.68■□□□□ 0.58
SGMS1-210ENST00000619438 GJC3Q8NFK1 279 aa18.68■□□□□ 0.58
SGMS1-210ENST00000619438 NABP1Q96AH0 204 aa18.68■□□□□ 0.58
SGMS1-210ENST00000619438 ZNF416Q9BWM5 594 aa18.68■□□□□ 0.58
SGMS1-210ENST00000619438 KCNK15Q9H427 330 aa18.68■□□□□ 0.58
SGMS1-210ENST00000619438 RAB22AQ9UL26 194 aa18.68■□□□□ 0.58
SGMS1-210ENST00000619438 MEIKINA0A087WXM9 373 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 A6NNC1 897 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 DHHO43323 396 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 BPNT1O95861 308 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 LPLP06858 475 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 GSTT2P0CG29 244 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 AKAIN1P0CW23 69 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 PGAP1Q75T13 922 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 C20orf196Q8IYI0 205 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 OR8B12Q8NGG6 310 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 OR4D6Q8NGJ1 314 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 OR51E1Q8TCB6 317 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 WFIKKN1Q96NZ8 548 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 RANBP3Q9H6Z4 567 aaPredicted RBP18.67■□□□□ 0.58
SGMS1-210ENST00000619438 ING4Q9UNL4 249 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 NPTNQ9Y639 398 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 HRNRQ86YZ3 2850 aaPredicted RBP18.67■□□□□ 0.58
SGMS1-210ENST00000619438 OTOGQ6ZRI0 2925 aa18.67■□□□□ 0.58
SGMS1-210ENST00000619438 ANKHD1Q8IWZ3 2542 aaKnown RBP18.66■□□□□ 0.58
SGMS1-210ENST00000619438 ZNF724A8MTY0 619 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 SCGNO76038 276 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 GNALP38405 381 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 CX3CR1P49238 355 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 VEGFCP49767 419 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 ENDOGQ14249 297 aaKnown RBP18.66■□□□□ 0.58
SGMS1-210ENST00000619438 DAZAP2Q15038 168 aaPredicted RBP18.66■□□□□ 0.58
SGMS1-210ENST00000619438 PHYHD1Q5SRE7 291 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 DOK3Q7L591 496 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 ZNF100Q8IYN0 542 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 NUDT16L1Q9BRJ7 211 aaKnown RBP18.66■□□□□ 0.58
SGMS1-210ENST00000619438 CNTD2Q9H8S5 307 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 PLSCR3Q9NRY6 295 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 NKIRAS2Q9NYR9 191 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 FLVCR2Q9UPI3 526 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 NOSIPQ9Y314 301 aaKnown RBP18.66■□□□□ 0.58
SGMS1-210ENST00000619438 BOLA1Q9Y3E2 137 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 ANKRD17O75179 2603 aaKnown RBP18.66■□□□□ 0.58
SGMS1-210ENST00000619438 FABP7O15540 132 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 IGLV3-1P01715 115 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 PRKXP51817 358 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 QRFPP83859 136 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 RBMS2Q15434 407 aaKnown RBP18.66■□□□□ 0.58
SGMS1-210ENST00000619438 SGCAQ16586 387 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 Q5BKY6 102 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 TFAP2EQ6VUC0 442 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 GLDNQ6ZMI3 551 aaPredicted RBP18.66■□□□□ 0.58
SGMS1-210ENST00000619438 UTS2BQ765I0 119 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 TMEM229BQ8NBD8 167 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 OR4C16Q8NGL9 310 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 SEH1LQ96EE3 360 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 OR10A4Q9H209 315 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 CLEC4MQ9H2X3 399 aaPredicted RBP18.66■□□□□ 0.58
SGMS1-210ENST00000619438 FLVCR1Q9Y5Y0 555 aa18.66■□□□□ 0.58
SGMS1-210ENST00000619438 METTL21EPA6NDL7 271 aa18.65■□□□□ 0.58
SGMS1-210ENST00000619438 SNRPGP15A8MWD9 76 aa18.65■□□□□ 0.58
SGMS1-210ENST00000619438 ARPC1BO15143 372 aaKnown RBP18.65■□□□□ 0.58
SGMS1-210ENST00000619438 HPXP02790 462 aa18.65■□□□□ 0.58
SGMS1-210ENST00000619438 ZNF20P17024 532 aa18.65■□□□□ 0.58
SGMS1-210ENST00000619438 RCVRNP35243 200 aa18.65■□□□□ 0.58
SGMS1-210ENST00000619438 GSK3AP49840 483 aa18.65■□□□□ 0.58
SGMS1-210ENST00000619438 ZNF84P51523 738 aa18.65■□□□□ 0.58
SGMS1-210ENST00000619438 MRPS34P82930 218 aaKnown RBP18.65■□□□□ 0.58
SGMS1-210ENST00000619438 ABLIM2Q6H8Q1 611 aa18.65■□□□□ 0.58
SGMS1-210ENST00000619438 Q6ZSR3 168 aa18.65■□□□□ 0.58
SGMS1-210ENST00000619438 CCDC54Q8NEL0 328 aa18.65■□□□□ 0.58
SGMS1-210ENST00000619438 OR52N4Q8NGI2 321 aa18.65■□□□□ 0.58
SGMS1-210ENST00000619438 APOC1P02654 83 aa18.64■□□□□ 0.57
SGMS1-210ENST00000619438 MELTFP08582 738 aa18.64■□□□□ 0.57
SGMS1-210ENST00000619438 CXCL3P19876 107 aa18.64■□□□□ 0.57
SGMS1-210ENST00000619438 OTX1P32242 354 aaPredicted RBP18.64■□□□□ 0.57
SGMS1-210ENST00000619438 GUCA2AQ02747 115 aa18.64■□□□□ 0.57
SGMS1-210ENST00000619438 LAMTOR1Q6IAA8 161 aa18.64■□□□□ 0.57
SGMS1-210ENST00000619438 TMEM53Q6P2H8 277 aa18.64■□□□□ 0.57
SGMS1-210ENST00000619438 ZNF283Q8N7M2 679 aa18.64■□□□□ 0.57
SGMS1-210ENST00000619438 GPR84Q9NQS5 396 aa18.64■□□□□ 0.57
SGMS1-210ENST00000619438 ZNF222Q9UK12 451 aa18.64■□□□□ 0.57
SGMS1-210ENST00000619438 IGKV3D-15A0A087WSY6 115 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms