RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 ZNF81P51508 661 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 H2BFSP57053 126 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 ARF1P84077 181 aaKnown RBP13.68□□□□□ -0.22
NR1H3-235ENST00000616973 SLC10A1Q14973 349 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 PPA1Q15181 289 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 RSPO4Q2I0M5 234 aaPredicted RBP13.68□□□□□ -0.22
NR1H3-235ENST00000616973 PABPC1L2AQ5JQF8 200 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 CLVS2Q5SYC1 327 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 TMED4Q7Z7H5 227 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 OR4K15Q8NH41 348 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 SPSB4Q96A44 273 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 C1QTNF5Q9BXJ0 243 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 hCG_38984A0A1B0GV85 526 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 SERPINE3A8MV23 424 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 ZNF587BE7ETH6 402 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 SLC22A5O76082 557 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 IFNA6P05013 189 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 CSN2P05814 226 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 COX5BP10606 129 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 SERPINA2P20848 420 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 DHRS2Q13268 280 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 OR8B8Q15620 311 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 DMRTC1Q5HYR2 192 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 ASCL4Q6XD76 172 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 COLCA1Q6ZS62 124 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 LHFPL2Q6ZUX7 228 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 OR8H1Q8NGG4 311 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 FNDC9Q8TBE3 224 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 ST8SIA4Q92187 359 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 PRRG4Q9BZD6 226 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 CALHM2Q9HA72 323 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 B3GNT2Q9NY97 397 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 FREM1Q5H8C1 2179 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 CFAP54Q96N23 3096 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 ARGFXA6NJG6 315 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 HMSDA8MTL9 139 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 IL2RAP01589 272 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 FTH1P19P0C7X4 201 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 ZNF35P13682 527 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 ZBTB25P24278 435 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 BLVRBP30043 206 aaPredicted RBP13.67□□□□□ -0.22
NR1H3-235ENST00000616973 MTCP1P56278 107 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 FAM3AP98173 230 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 HOGA1Q86XE5 327 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 ARRDC1Q8N5I2 433 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 TECTBQ96PL2 329 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 PECRQ9BY49 303 aa13.67□□□□□ -0.22
NR1H3-235ENST00000616973 CEACAM18A8MTB9 384 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 IGHV3-9P01782 118 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 RBP2P50120 134 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 UBE2MP61081 183 aaKnown RBP13.66□□□□□ -0.22
NR1H3-235ENST00000616973 SRSF4Q08170 494 aaKnown RBP13.66□□□□□ -0.22
NR1H3-235ENST00000616973 ARFRP1Q13795 201 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 MICBQ29980 383 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 ATP1A1-AS1Q5TC04 95 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 LYG2Q86SG7 212 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 CPEB3Q8NE35 698 aaKnown RBP13.66□□□□□ -0.22
NR1H3-235ENST00000616973 ZNF680Q8NEM1 530 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 DEFB124Q8NES8 71 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 FBXW5Q969U6 566 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 APH1AQ96BI3 265 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 WDR89Q96FK6 387 aaPredicted RBP13.66□□□□□ -0.22
NR1H3-235ENST00000616973 METTL9Q9H1A3 318 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 OR2AT4A6NND4 320 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 SIX6O95475 246 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 NRASP01111 189 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 PMP2P02689 132 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 TMEM225BP0DP42 221 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 HLA-GP17693 338 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 NFYAP23511 347 aaPredicted RBP13.66□□□□□ -0.22
NR1H3-235ENST00000616973 ZNF92Q03936 586 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 ZNF766Q5HY98 468 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 DCAF12L2Q5VW00 463 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 LPCAT3Q6P1A2 487 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.66□□□□□ -0.22
NR1H3-235ENST00000616973 TMEM178AQ8NBL3 297 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 OR10K1Q8NGX5 313 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 TERB2Q8NHR7 220 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 Q96M66 194 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 CLEC4MQ9H2X3 399 aaPredicted RBP13.66□□□□□ -0.22
NR1H3-235ENST00000616973 PTPRBP23467 1997 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 DNAJC13O75165 2243 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 ZNF407Q9C0G0 2248 aa13.66□□□□□ -0.22
NR1H3-235ENST00000616973 MPC2O95563 127 aa13.65□□□□□ -0.22
NR1H3-235ENST00000616973 EDN3P14138 238 aa13.65□□□□□ -0.22
NR1H3-235ENST00000616973 CXCL2P19875 107 aa13.65□□□□□ -0.22
NR1H3-235ENST00000616973 SSTR2P30874 369 aa13.65□□□□□ -0.22
NR1H3-235ENST00000616973 TAS2R31P59538 309 aa13.65□□□□□ -0.22
NR1H3-235ENST00000616973 TGIF1Q15583 401 aa13.65□□□□□ -0.22
NR1H3-235ENST00000616973 LY6G6FQ5SQ64 297 aa13.65□□□□□ -0.22
NR1H3-235ENST00000616973 C11orf88Q6PI97 169 aa13.65□□□□□ -0.22
NR1H3-235ENST00000616973 PLXDC2Q6UX71 529 aa13.65□□□□□ -0.22
NR1H3-235ENST00000616973 BORCS8Q96FH0 119 aa13.65□□□□□ -0.22
NR1H3-235ENST00000616973 ZNF552Q9H707 407 aaPredicted RBP13.65□□□□□ -0.22
NR1H3-235ENST00000616973 TNRC6AQ8NDV7 1962 aaKnown RBP13.64□□□□□ -0.23
NR1H3-235ENST00000616973 IGKV1-27A0A075B6S5 117 aa13.64□□□□□ -0.23
NR1H3-235ENST00000616973 ZNF816-ZNF321PA0A0X1KG74 233 aa13.64□□□□□ -0.23
NR1H3-235ENST00000616973 MCRIP1C9JLW8 97 aa13.64□□□□□ -0.23
NR1H3-235ENST00000616973 HLA-AP01891 365 aaKnown RBP13.64□□□□□ -0.23
NR1H3-235ENST00000616973 CD34P28906 385 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms