RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 NMES1Q9C002 83 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 PPP1R3EQ9H7J1 279 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.9■□□□□ 0.3
SPAST-203ENST00000615843 FAM24AA6NFZ4 105 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 SEMG1P04279 462 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 SUB1P53999 127 aaKnown RBP eCLIP16.9■□□□□ 0.3
SPAST-203ENST00000615843 MORN4Q8NDC4 146 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 PACRGQ96M98 296 aaPredicted RBP16.9■□□□□ 0.3
SPAST-203ENST00000615843 GPR87Q9BY21 358 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 ANKRD10Q9NXR5 420 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 SLC31A2O15432 143 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 HAAOP46952 286 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 RHBDD1Q8TEB9 315 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 DNAJB12Q9NXW2 375 aaKnown RBP16.9■□□□□ 0.3
SPAST-203ENST00000615843 ARID1AO14497 2285 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 NRG2O14511 850 aaPredicted RBP16.9■□□□□ 0.3
SPAST-203ENST00000615843 TIAL1Q01085 375 aaKnown RBP eCLIP16.9■□□□□ 0.3
SPAST-203ENST00000615843 Q3ZCU0 254 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 OR2C3Q8N628 320 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 POM121Q96HA1 1249 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 MRGPRX4Q96LA9 322 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 TECTBQ96PL2 329 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 DYNLRB1Q9NP97 96 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 MAP1LC3B2A6NCE7 125 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 NKAIN1Q4KMZ8 207 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 TAAR9Q96RI9 348 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 MAP1LC3BQ9GZQ8 125 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 OPN1MWP04001 364 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 CT45A10P0DMU9 189 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 OPN1MW2P0DN77 364 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 OPN1MW3P0DN78 364 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 CDAP32320 146 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 CDKN2AP42771 156 aaKnown RBP16.89■□□□□ 0.29
SPAST-203ENST00000615843 SULT1A1P50225 295 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 LIMK1P53667 647 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 TMEM267Q0VDI3 215 aaPredicted RBP16.89■□□□□ 0.29
SPAST-203ENST00000615843 OR51B4Q9Y5P0 310 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 PHIPQ8WWQ0 1821 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 PIK3IP1Q96FE7 263 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 CHRDL1Q9BU40 450 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 KCNK15Q9H427 330 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 FBXO34Q9NWN3 711 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 RREB1Q92766 1687 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 LINC01553A4QN01 128 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 GPR37O15354 613 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 CEACAM5P06731 702 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 OR8B8Q15620 311 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 CA10Q9NS85 328 aa16.89■□□□□ 0.29
SPAST-203ENST00000615843 DHHO43323 396 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 ADAM20O43506 726 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 OR8G1Q15617 311 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 TMEM91Q6ZNR0 172 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 FBXL14Q8N1E6 418 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 NOXO1Q8NFA2 376 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 OR4D11Q8NGI4 311 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 PHOSPHO2Q8TCD6 241 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 EID2BQ96D98 161 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 NAA60Q9H7X0 242 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 AMDHD2Q9Y303 409 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 NUP214P35658 2090 aaPredicted RBP16.88■□□□□ 0.29
SPAST-203ENST00000615843 FUT3P21217 361 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 USF1P22415 310 aaPredicted RBP16.88■□□□□ 0.29
SPAST-203ENST00000615843 PRR27Q6MZM9 219 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 RPS19BP1Q86WX3 136 aaKnown RBP16.88■□□□□ 0.29
SPAST-203ENST00000615843 ZNF683Q8IZ20 524 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 TCTEX1D1Q8N7M0 179 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 IL22RA2Q969J5 263 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 C12orf49Q9H741 205 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 OBP2AQ9NY56 170 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 BCORQ6W2J9 1755 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 TRAV34A0A0B4J273 112 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 FUT6P51993 359 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 KISS1Q15726 138 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 EXT1Q16394 746 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 YRDCQ86U90 279 aaKnown RBP16.88■□□□□ 0.29
SPAST-203ENST00000615843 EXTL1Q92935 676 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 ZDHHC23Q8IYP9 409 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 CISD2Q8N5K1 135 aaKnown RBP16.88■□□□□ 0.29
SPAST-203ENST00000615843 VN1R1Q9GZP7 353 aa16.88■□□□□ 0.29
SPAST-203ENST00000615843 PNRC1Q12796 327 aaPredicted RBP16.87■□□□□ 0.29
SPAST-203ENST00000615843 LSRQ86X29 649 aaPredicted RBP16.87■□□□□ 0.29
SPAST-203ENST00000615843 MEGF10Q96KG7 1140 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 TMPRSS13Q9BYE2 586 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 RAB33BQ9H082 229 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 YTHDF2Q9Y5A9 579 aaKnown RBP16.87■□□□□ 0.29
SPAST-203ENST00000615843 C5orf49A4QMS7 147 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 OR5G3P0C626 314 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 PTTG1IPP53801 180 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 RAC1P63000 192 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 FOXF1Q12946 379 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 SHHQ15465 462 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 C21orf62-AS1Q17RA5 79 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 DGAT2L6Q6ZPD8 337 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 TSPAN32Q96QS1 320 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 CNTD2Q9H8S5 307 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 KIAA1551Q9HCM1 1747 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 MRM2Q9UI43 246 aaKnown RBP16.87■□□□□ 0.29
SPAST-203ENST00000615843 GATCO43716 136 aaKnown RBP16.87■□□□□ 0.29
SPAST-203ENST00000615843 NMBP08949 121 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms