RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 OR10AC1Q8NH08 325 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 ZNF420Q8TAQ5 688 aaPredicted RBP11.19□□□□□ -0.62
MDC1-209ENST00000613547 HPSE2Q8WWQ2 592 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 SGCDQ92629 289 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 GHSRQ92847 366 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 FGGYQ96C11 551 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 TMUB1Q9BVT8 246 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 PPP1R3EQ9H7J1 279 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 GPR173Q9NS66 373 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 RNF7Q9UBF6 113 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 ZNF281Q9Y2X9 895 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 WIPI2Q9Y4P8 454 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 NPTNQ9Y639 398 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 A6NIN4 97 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 ZNF732B4DXR9 585 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 INHBBP09529 407 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 CELP19835 753 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 BTG1P62324 171 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 YIF1BQ5BJH7 314 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 AVPI1Q5T686 147 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 DMKNQ6E0U4 476 aaPredicted RBP11.18□□□□□ -0.62
MDC1-209ENST00000613547 UTS2BQ765I0 119 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 ZNF573Q86YE8 665 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 SERPINA12Q8IW75 414 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 MUC20Q8N307 709 aaPredicted RBP11.18□□□□□ -0.62
MDC1-209ENST00000613547 ZFP41Q8N8Y5 198 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 OR5D14Q8NGL3 314 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 RPS4Y2Q8TD47 263 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 THRSPQ92748 146 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 GAL3ST1Q99999 423 aa11.18□□□□□ -0.62
MDC1-209ENST00000613547 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 IGHV4-61A0A0C4DH41 118 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 PNMA8CA0A1B0GUJ8 204 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 CDIPTO14735 213 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 PLPP2O43688 288 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 LMX1BO60663 402 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 CYB5R3P00387 301 aaPredicted RBP11.17□□□□□ -0.62
MDC1-209ENST00000613547 CD1AP06126 327 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 PRKACBP22694 351 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 THBS2P35442 1172 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 MDH2P40926 338 aaKnown RBP11.17□□□□□ -0.62
MDC1-209ENST00000613547 FUT6P51993 359 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 TBCEQ15813 527 aaPredicted RBP11.17□□□□□ -0.62
MDC1-209ENST00000613547 KCNJ8Q15842 424 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 WDR86Q86TI4 376 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 CIARTQ8N365 385 aaPredicted RBP11.17□□□□□ -0.62
MDC1-209ENST00000613547 SPICQ8N5J4 248 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 SPSB1Q96BD6 273 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 RAB39BQ96DA2 213 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 ADAT3Q96EY9 351 aaPredicted RBP11.17□□□□□ -0.62
MDC1-209ENST00000613547 BORCS8Q96FH0 119 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 OR5M11Q96RB7 305 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 TLNRD1Q9H1K6 362 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 NARFLQ9H6Q4 476 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 DCAF16Q9NXF7 216 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 LSM2Q9Y333 95 aaKnown RBP11.17□□□□□ -0.62
MDC1-209ENST00000613547 PPIAL4AQ9Y536 164 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 LRRC42Q9Y546 428 aa11.17□□□□□ -0.62
MDC1-209ENST00000613547 SIRT4Q9Y6E7 314 aaPredicted RBP11.17□□□□□ -0.62
MDC1-209ENST00000613547 A0A096LNT2 108 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 FAM230AA0A1W2PPH8 454 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 PQLC2LA1A4F0 135 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 FSTL3O95633 263 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 IGHV2-70P01814 119 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 HSMCR30P0CW71 290 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 ATF1P18846 271 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 PMELP40967 661 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 SOX2P48431 317 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 ZMYND11Q15326 602 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 UBE2V2Q15819 145 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 Q499Y3 187 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 TMEM155Q4W5P6 130 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 FAM76BQ5HYJ3 339 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 DMRTC1Q5HYR2 192 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 WDR82Q6UXN9 313 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 ZNF826PQ6ZT77 177 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 MS4A15Q8N5U1 240 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 PARP16Q8N5Y8 322 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 BOLLQ8N9W6 283 aaKnown RBP11.16□□□□□ -0.62
MDC1-209ENST00000613547 SCCPDHQ8NBX0 429 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 DNAAF1Q8NEP3 725 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 OR13C9Q8NGT0 318 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 OR10Z1Q8NGY1 313 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 ZNF671Q8TAW3 534 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 TRMT10AQ8TBZ6 339 aaKnown RBP11.16□□□□□ -0.62
MDC1-209ENST00000613547 NPRL2Q8WTW4 380 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 LRRC29Q8WV35 223 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 UFD1Q92890 307 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 RPL3LQ92901 407 aaKnown RBP11.16□□□□□ -0.62
MDC1-209ENST00000613547 TMEM106AQ96A25 262 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 CPNE2Q96FN4 548 aaPredicted RBP11.16□□□□□ -0.62
MDC1-209ENST00000613547 OR51I2Q9H344 312 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 ZCCHC4Q9H5U6 513 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 ISYNA1Q9NPH2 558 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 CKLFQ9UBR5 152 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 PCDHB10Q9UN67 800 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 LRCH1Q9Y2L9 728 aa11.16□□□□□ -0.62
MDC1-209ENST00000613547 POLDIP2Q9Y2S7 368 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms