RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 THBS4P35443 961 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 PTGFRP43088 359 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 CCR6P51684 374 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 LINC00303Q3SY05 128 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 COLCA1Q6ZS62 124 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 GABRG1Q8N1C3 465 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 OR56B2PQ8NGI1 322 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 OR6K3Q8NGY3 331 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 TNFAIP8L1Q8WVP5 186 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 PP6455Q8WZ26 134 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 FYTTD1Q96QD9 318 aaKnown RBP10.65□□□□□ -0.71
TP53-219ENST00000610538 UQCC2Q9BRT2 126 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 PLSCR4Q9NRQ2 329 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 RBFOX1Q9NWB1 397 aaKnown RBP10.65□□□□□ -0.71
TP53-219ENST00000610538 PROCRQ9UNN8 238 aa10.65□□□□□ -0.71
TP53-219ENST00000610538 PKD1L2Q7Z442 2459 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 IGKV1-27A0A075B6S5 117 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 TMEM235A6NFC5 223 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 ZNF850A8MQ14 1090 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 LILRA1O75019 489 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 CRTAPO75718 401 aaPredicted RBP10.64□□□□□ -0.71
TP53-219ENST00000610538 CFPP27918 469 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 CD83Q01151 205 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 KRTCAP3Q53RY4 240 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 TMEM255AQ5JRV8 349 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 SFRP4Q6FHJ7 346 aaPredicted RBP10.64□□□□□ -0.71
TP53-219ENST00000610538 MOB3CQ70IA8 216 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 OR8S1Q8NH09 359 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 PAPOLGQ9BWT3 736 aaKnown RBP10.64□□□□□ -0.71
TP53-219ENST00000610538 CACNG2Q9Y698 323 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 ARPC4-TTLL3A0A0A6YYG9 625 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 MBD3L4A6NDZ8 208 aaPredicted RBP10.64□□□□□ -0.71
TP53-219ENST00000610538 MBD3L3A6NE82 208 aaPredicted RBP10.64□□□□□ -0.71
TP53-219ENST00000610538 MBD3L5A6NJ08 208 aaPredicted RBP10.64□□□□□ -0.71
TP53-219ENST00000610538 GABARAPH6UMI1 98 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 LDLRAD4O15165 306 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 TMEM225BP0DP42 221 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 GNB3P16520 340 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 SERPINA2P20848 420 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 GIFP27352 417 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 ERP29P30040 261 aaKnown RBP10.64□□□□□ -0.71
TP53-219ENST00000610538 ERVS71-1P61550 626 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 QRFPP83859 136 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 SNTB2Q13425 540 aaKnown RBP10.64□□□□□ -0.71
TP53-219ENST00000610538 ZNF324BQ6AW86 544 aaPredicted RBP10.64□□□□□ -0.71
TP53-219ENST00000610538 MZT2BQ6NZ67 158 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 PLET1Q6UQ28 207 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 GFRALQ6UXV0 394 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 RFPL4BQ6ZWI9 263 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 MRPL21Q7Z2W9 205 aaKnown RBP10.64□□□□□ -0.71
TP53-219ENST00000610538 TCTE3Q8IZS6 198 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 MBD3L2Q8NHZ7 208 aaPredicted RBP10.64□□□□□ -0.71
TP53-219ENST00000610538 ZNF75AQ96N20 296 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 GON7Q9BXV9 100 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 MCUBQ9NWR8 336 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 GPR160Q9UJ42 338 aa10.64□□□□□ -0.71
TP53-219ENST00000610538 TRAV6A0A075B6T7 132 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 IGHV3-64DA0A0J9YX35 117 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 WIPF3A6NGB9 483 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 WDR1O75083 606 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 TMEM127O75204 238 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 GABRA1P14867 456 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 MNDAP41218 407 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 ARPC4P59998 168 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 C1orf185Q5T7R7 199 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 PLCXD3Q63HM9 321 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 DOLPP1Q86YN1 238 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 NANOS1Q8WY41 292 aaKnown RBP10.63□□□□□ -0.71
TP53-219ENST00000610538 AKAP1Q92667 903 aaKnown RBP eCLIP10.63□□□□□ -0.71
TP53-219ENST00000610538 APOBEC3DQ96AK3 386 aaPredicted RBP10.63□□□□□ -0.71
TP53-219ENST00000610538 C1orf147Q96MC9 270 aaPredicted RBP10.63□□□□□ -0.71
TP53-219ENST00000610538 BEX2Q9BXY8 128 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 SELENOIQ9C0D9 397 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 RAB22AQ9UL26 194 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 DIDO1Q9BTC0 2240 aaKnown RBP10.63□□□□□ -0.71
TP53-219ENST00000610538 RAB27BO00194 218 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 XRCC2O43543 280 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 CGAP01215 116 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 SCAND1P57086 179 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 MALLQ13021 153 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 OLFML2AQ68BL7 652 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 PNLDC1Q8NA58 520 aaKnown RBP10.63□□□□□ -0.71
TP53-219ENST00000610538 FAM57AQ8TBR7 257 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 UPRTQ96BW1 309 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 NKIRAS2Q9NYR9 191 aa10.63□□□□□ -0.71
TP53-219ENST00000610538 LRBAP50851 2863 aa10.62□□□□□ -0.71
TP53-219ENST00000610538 METTL21EPA6NDL7 271 aa10.62□□□□□ -0.71
TP53-219ENST00000610538 EEF1E1-BLOC1S5C9J1V9 151 aa10.62□□□□□ -0.71
TP53-219ENST00000610538 SOCS1O15524 211 aa10.62□□□□□ -0.71
TP53-219ENST00000610538 ZNF14P17017 642 aaPredicted RBP10.62□□□□□ -0.71
TP53-219ENST00000610538 HOXC12P31275 282 aa10.62□□□□□ -0.71
TP53-219ENST00000610538 PRSS3P35030 304 aa10.62□□□□□ -0.71
TP53-219ENST00000610538 TDGF1P3P51864 188 aa10.62□□□□□ -0.71
TP53-219ENST00000610538 TMEM95Q3KNT9 176 aa10.62□□□□□ -0.71
TP53-219ENST00000610538 PCGF3Q3KNV8 242 aa10.62□□□□□ -0.71
TP53-219ENST00000610538 CLVS2Q5SYC1 327 aa10.62□□□□□ -0.71
TP53-219ENST00000610538 OR2T2Q6IF00 324 aa10.62□□□□□ -0.71
TP53-219ENST00000610538 ZNF474Q6S9Z5 364 aaPredicted RBP10.62□□□□□ -0.71
TP53-219ENST00000610538 BAIAP2L2Q6UXY1 529 aa10.62□□□□□ -0.71
TP53-219ENST00000610538 LIX1LQ8IVB5 337 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms