RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ABI3Q9P2A4 366 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 B4GALT7Q9UBV7 327 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 U3KQ87 197 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 ZNF318Q5VUA4 2279 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 CADP27708 2225 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 C13orf42A0A1B0GVH6 325 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 DISC1C4P0D8 188 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 EEF1E1-BLOC1S5C9J1V9 151 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 M0R233 179 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 AMY2BP19961 511 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 RAB6AP20340 208 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 CLDN18P56856 261 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 EXOSC2Q13868 293 aaKnown RBP13.84□□□□□ -0.19
CTSA-214ENST00000606788 SLC9A3R2Q15599 337 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 NUFIP2Q7Z417 695 aaKnown RBP13.84□□□□□ -0.19
CTSA-214ENST00000606788 FBXW5Q969U6 566 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 SF3B5Q9BWJ5 86 aaKnown RBP13.84□□□□□ -0.19
CTSA-214ENST00000606788 CLEC4MQ9H2X3 399 aaPredicted RBP13.84□□□□□ -0.19
CTSA-214ENST00000606788 HEXA-AS1Q9H8Q6 139 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 FN3KRPQ9HA64 309 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 IGKV1D-8A0A087WSZ0 117 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 C5orf49A4QMS7 147 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 GMFBP60983 142 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 ECH1Q13011 328 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 PIGYQ3MUY2 71 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 ALKAL2Q6UX46 152 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 MOB3CQ70IA8 216 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 ADAMTS17Q8TE56 1095 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 GPR87Q9BY21 358 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 UPB1Q9UBR1 384 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 OPN4Q9UHM6 478 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 NBASA2RRP1 2371 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 OR14I1A6ND48 311 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 S100A1P23297 94 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 RAB35Q15286 201 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 ABLIM2Q6H8Q1 611 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 ALKBH2Q6NS38 261 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 CSNK2A3Q8NEV1 391 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 FAAP24Q9BTP7 215 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 ARL6Q9H0F7 186 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 SLCO5A1Q9H2Y9 848 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 SCPEP1Q9HB40 452 aa13.84□□□□□ -0.19
CTSA-214ENST00000606788 HSPB6O14558 160 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 SYNGR4O95473 234 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 IL5P05113 134 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 CD34P28906 385 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 SCRN3Q0VDG4 424 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 ZBTB37Q5TC79 503 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 MCEMP1Q8IX19 187 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 NTNG2Q96CW9 530 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 GPR137Q96N19 417 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 CHST5Q9GZS9 411 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 ZNF224Q9NZL3 707 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 PRSS50Q9UI38 385 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 ANKRD11Q6UB99 2663 aaPredicted RBP13.83□□□□□ -0.2
CTSA-214ENST00000606788 CSTBP04080 98 aaKnown RBP13.83□□□□□ -0.2
CTSA-214ENST00000606788 HPNP05981 417 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 SP1P08047 785 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 WT1P19544 449 aaPredicted RBP13.83□□□□□ -0.2
CTSA-214ENST00000606788 CRYGSP22914 178 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 RBMXP38159 391 aaKnown RBP13.83□□□□□ -0.2
CTSA-214ENST00000606788 IL13RA1P78552 427 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 AIMP2Q13155 320 aaKnown RBP13.83□□□□□ -0.2
CTSA-214ENST00000606788 OPCMLQ14982 345 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 RSU1Q15404 277 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 HIKESHIQ53FT3 197 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 SPATA46Q5T0L3 261 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 CPT1CQ8TCG5 803 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 URM1Q9BTM9 101 aaKnown RBP13.83□□□□□ -0.2
CTSA-214ENST00000606788 PLEKHJ1Q9NW61 149 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 TIMM10BQ9Y5J6 103 aa13.83□□□□□ -0.2
CTSA-214ENST00000606788 C21orf140B9A014 251 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 CYTIPO60759 359 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 MTRF1O75570 445 aaKnown RBP13.82□□□□□ -0.2
CTSA-214ENST00000606788 KNG1P01042 644 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 NGFP01138 241 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 CCL1P22362 96 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 GK2Q14410 553 aaPredicted RBP13.82□□□□□ -0.2
CTSA-214ENST00000606788 PLCXD3Q63HM9 321 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 ZNF100Q8IYN0 542 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 CDC6Q99741 560 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 SNRPGP15A8MWD9 76 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 SULT1C2O00338 296 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 FARS2O95363 451 aaKnown RBP13.82□□□□□ -0.2
CTSA-214ENST00000606788 TPOP07202 933 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 CD37P11049 281 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 OTX1P32242 354 aaPredicted RBP13.82□□□□□ -0.2
CTSA-214ENST00000606788 OR3A3P47888 321 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 OR3A2P47893 321 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 TSC22D1Q15714 1073 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 BORCS8Q96FH0 119 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 GPR160Q9UJ42 338 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 MCTS1Q9ULC4 181 aaKnown RBP13.82□□□□□ -0.2
CTSA-214ENST00000606788 PCDHGA1Q9Y5H4 931 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 SPTA1P02549 2419 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 ZNF850A8MQ14 1090 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 TERTO14746 1132 aaKnown RBP13.82□□□□□ -0.2
CTSA-214ENST00000606788 FTH1P19P0C7X4 201 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 EDN3P14138 238 aa13.82□□□□□ -0.2
CTSA-214ENST00000606788 PPP3CBP16298 524 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms