RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CST11Q9H112 138 aa18.58■□□□□ 0.56
USP6NL-204ENST00000606752 RBFOX1Q9NWB1 397 aaKnown RBP18.58■□□□□ 0.56
USP6NL-204ENST00000606752 MYO7BQ6PIF6 2116 aa18.57■□□□□ 0.56
USP6NL-204ENST00000606752 IGKV1-27A0A075B6S5 117 aa18.57■□□□□ 0.56
USP6NL-204ENST00000606752 RAB27BO00194 218 aa18.57■□□□□ 0.56
USP6NL-204ENST00000606752 CDC14BO60729 498 aa18.57■□□□□ 0.56
USP6NL-204ENST00000606752 CECR9P0C854 216 aa18.57■□□□□ 0.56
USP6NL-204ENST00000606752 FAM157BP0CG42 384 aa18.57■□□□□ 0.56
USP6NL-204ENST00000606752 GDNFP39905 211 aa18.57■□□□□ 0.56
USP6NL-204ENST00000606752 SRP9P49458 86 aaKnown RBP18.57■□□□□ 0.56
USP6NL-204ENST00000606752 ATP1B3P54709 279 aa18.57■□□□□ 0.56
USP6NL-204ENST00000606752 FAM189A2Q15884 450 aa18.57■□□□□ 0.56
USP6NL-204ENST00000606752 CDH24Q86UP0 819 aa18.57■□□□□ 0.56
USP6NL-204ENST00000606752 VKORC1Q9BQB6 163 aa18.57■□□□□ 0.56
USP6NL-204ENST00000606752 RBMX2Q9Y388 322 aaKnown RBP18.57■□□□□ 0.56
USP6NL-204ENST00000606752 MPIG6BO95866 241 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 CHRM2P08172 466 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 TMEM225BP0DP42 221 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 PRDX4Q13162 271 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 MOGAT2Q3SYC2 334 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 SPATA46Q5T0L3 261 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 C1QTNF12Q5T7M4 302 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 TMEM211Q6ICI0 200 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 UNQ6126/PRO20091Q6UXV3 157 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 ACBD4Q8NC06 268 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 NEDD4LQ96PU5 975 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 TMEM59Q9BXS4 323 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 LPAR5Q9H1C0 372 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 GPR160Q9UJ42 338 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 ZZEF1O43149 2961 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 CRTAPO75718 401 aaPredicted RBP18.56■□□□□ 0.56
USP6NL-204ENST00000606752 PRSS3P35030 304 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 CASP6P55212 293 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 NCCRP1Q6ZVX7 275 aaPredicted RBP18.56■□□□□ 0.56
USP6NL-204ENST00000606752 ZDHHC23Q8IYP9 409 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 ST6GALNAC3Q8NDV1 305 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 STEAP2Q8NFT2 490 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 MUCL1Q96DR8 90 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 NUDT16L1Q9BRJ7 211 aaKnown RBP18.56■□□□□ 0.56
USP6NL-204ENST00000606752 OR2J1Q9GZK6 312 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 BANF2Q9H503 90 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 KLK11Q9UBX7 282 aa18.56■□□□□ 0.56
USP6NL-204ENST00000606752 DSPP15924 2871 aaKnown RBP18.55■□□□□ 0.56
USP6NL-204ENST00000606752 IGHV1-18A0A0C4DH31 117 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 MEIOCA2RUB1 952 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 ANKRD30BLA7E2S9 258 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 RAD52P43351 418 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 FAM27E3Q08E93 113 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 GPR176Q14439 515 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 CEACAM21Q3KPI0 293 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 OR2T2Q6IF00 324 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 OR1J1Q8NGS3 322 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 ENKURQ8TC29 256 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 RND1Q92730 232 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 CMBLQ96DG6 245 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 ZC3HAV1LQ96H79 300 aaKnown RBP18.55■□□□□ 0.56
USP6NL-204ENST00000606752 DMRTA2Q96SC8 542 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 URM1Q9BTM9 101 aaKnown RBP18.55■□□□□ 0.56
USP6NL-204ENST00000606752 ELOVL5Q9NYP7 299 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 CRIM1Q9NZV1 1036 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 CACNG2Q9Y698 323 aa18.55■□□□□ 0.56
USP6NL-204ENST00000606752 A0A1W2PP11 408 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 ECDO95905 644 aaPredicted RBP18.54■□□□□ 0.56
USP6NL-204ENST00000606752 RAC2P15153 192 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 TUBG1P23258 451 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 VEGFCP49767 419 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 DYRK1AQ13627 763 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 KLF9Q13886 244 aaPredicted RBP18.54■□□□□ 0.56
USP6NL-204ENST00000606752 C3orf36Q3SXR2 165 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 ASCL4Q6XD76 172 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 LIX1LQ8IVB5 337 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 SLC25A40Q8TBP6 338 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 CCDC120Q96HB5 630 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 ACTR6Q9GZN1 396 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 METTL9Q9H1A3 318 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 ELL3Q9HB65 397 aaPredicted RBP18.54■□□□□ 0.56
USP6NL-204ENST00000606752 TUBG2Q9NRH3 451 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 JKAMPQ9P055 326 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 MPC1Q9Y5U8 109 aa18.54■□□□□ 0.56
USP6NL-204ENST00000606752 TRGV8A0A0C4DH27 118 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 CENPXA8MT69 81 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 H7C417 338 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 SULT1C2O00338 296 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 RBBP9O75884 186 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 GSTT2BP0CG30 244 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 KIR2DL3P43628 341 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 AP3S2P59780 193 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 BHLHE23Q8NDY6 225 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 OR10R2Q8NGX6 335 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 HIST1H2AAQ96QV6 131 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 USB1Q9BQ65 265 aaKnown RBP18.53■□□□□ 0.56
USP6NL-204ENST00000606752 MTFP1Q9UDX5 166 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 IGHV2OR16-5A0A0B4J2B6 119 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 FAM240BA0A1B0GVZ2 78 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 PQLC2LA1A4F0 135 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 ERVS71-1P61550 626 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 RPS27AP62979 156 aaKnown RBP18.53■□□□□ 0.56
USP6NL-204ENST00000606752 PDZK1IP1Q13113 114 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 LY6DQ14210 128 aa18.53■□□□□ 0.56
USP6NL-204ENST00000606752 PPA1Q15181 289 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms