RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 ZDHHC23Q8IYP9 409 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 Q8N7P7 452 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 BBS1Q8NFJ9 593 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 OR8B12Q8NGG6 310 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 OTOSQ8NHW6 89 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 C12orf43Q96C57 262 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 MED30Q96HR3 178 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 GAFA1Q96PS6 74 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 TTTY10Q9BZA0 68 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 FGF23Q9GZV9 251 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 ZNF556Q9HAH1 456 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 ZNF816-ZNF321PA0A0X1KG74 233 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 TMEM210A6NLX4 147 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 ZNF732B4DXR9 585 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 RHBDL1O75783 438 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 MRPL3P09001 348 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 PRKACGP22612 351 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 TMEM236Q5W0B7 351 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 CD300LDQ6UXZ3 194 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 MOB3CQ70IA8 216 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 C1QL4Q86Z23 238 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 HS3ST5Q8IZT8 346 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 FAM185AQ8N0U4 392 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 ARHGAP24Q8N264 748 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 ZNF454Q8N9F8 522 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 TMEM185AQ8NFB2 350 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 OR10Z1Q8NGY1 313 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 DUS3LQ96G46 650 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 TLNRD1Q9H1K6 362 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 PPA2Q9H2U2 334 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 MMP27Q9H306 513 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 ZNRD1Q9P1U0 126 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 NLKQ9UBE8 527 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 LAMP5Q9UJQ1 280 aa14.42□□□□□ -0.1
SHKBP1-223ENST00000600552 VWFP04275 2813 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 OR2AT4A6NND4 320 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 H0YAE9 185 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 GPR37O15354 613 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 CST4P01036 141 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 HMGN1P05114 100 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 SAA4P35542 130 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 PROK1P58294 105 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 RPL15P61313 204 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 BLMHQ13867 455 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 LY6EQ16553 131 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 ATPAF1Q5TC12 328 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 ZNF788Q6ZQV5 615 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 THAP5Q7Z6K1 395 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 ZSCAN4Q8NAM6 433 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 ANGPTL6Q8NI99 470 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 HPSE2Q8WWQ2 592 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 THTPAQ9BU02 230 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 YY1AP1Q9H869 796 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 ABCB9Q9NP78 766 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 VPREB3Q9UKI3 123 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 LRP12Q9Y561 859 aa14.41□□□□□ -0.1
SHKBP1-223ENST00000600552 ANGPTL7O43827 346 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 CLPXO76031 633 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 TSPAN15O95858 294 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 ACAA1P09110 424 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 PAX6P26367 422 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 MAP2K3P46734 347 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 PSMA6P60900 246 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 EGR3Q06889 387 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 APOFQ13790 326 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 ADGRG5Q8IZF4 528 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 ZNRF1Q8ND25 227 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 NPRL2Q8WTW4 380 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 CANT1Q8WVQ1 401 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 RORBQ92753 470 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 NIPAL2Q9H841 368 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 GTF2A1LQ9UNN4 478 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 NOTCH1P46531 2555 aa14.4□□□□□ -0.1
SHKBP1-223ENST00000600552 TMEM269A0A1B0GVZ9 245 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 SLC22A31A6NKX4 558 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 SIGLEC5O15389 551 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 GSC2O15499 205 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 OSMP13725 252 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 CALB2P22676 271 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 PLCXD3Q63HM9 321 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 HIST2H2BDQ6DRA6 164 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 SPATA24Q86W54 205 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 BATF2Q8N1L9 274 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 PAPD5Q8NDF8 572 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 C17orf50Q8WW18 174 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 PPP1R14AQ96A00 147 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 ASB9Q96DX5 294 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 TEX12Q9BXU0 123 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 DNTTIP1Q9H147 329 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 TVP23BQ9NYZ1 205 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 SIGLEC9Q9Y336 463 aa14.39□□□□□ -0.11
SHKBP1-223ENST00000600552 H3BUX3 64 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 PRODHO43272 600 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 T-ENOLP0DO92 83 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 PSG2P11465 335 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 ALOX5APP20292 161 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 TGFBR2P37173 567 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 UBE2E1P51965 193 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 GNG3P63215 75 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 SNAPC1Q16533 368 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms