RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 PRR14LQ5THK1 2151 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 A0A0A6YYH2 397 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 WIPF3A6NGB9 483 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 A6NJ64 397 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 SOCS1O15524 211 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 CGAP01215 116 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 TCRBP04435 133 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 UBBP0CG47 229 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 GTF2F2P13984 249 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 ZNF14P17017 642 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-218ENST00000600383 UCNP55089 124 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 TMEM42Q69YG0 159 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 ZNF324BQ6AW86 544 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-218ENST00000600383 OR51T1Q8NGJ9 327 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 OR10R2Q8NGX6 335 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 DVL3Q92997 716 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-218ENST00000600383 CCDC120Q96HB5 630 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 C7orf50Q9BRJ6 194 aaKnown RBP13.09□□□□□ -0.31
HIF3A-218ENST00000600383 NKIRAS2Q9NYR9 191 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 ZNF629Q9UEG4 869 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-218ENST00000600383 GPR160Q9UJ42 338 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 SH3BGRL2Q9UJC5 107 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 A0A0B4J293 547 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 NAT2P11245 290 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 MGMTP16455 207 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 PTGER4P35408 488 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 MRPL49Q13405 166 aaKnown RBP13.09□□□□□ -0.31
HIF3A-218ENST00000600383 PRR30Q53SZ7 412 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-218ENST00000600383 DNM1P46Q6ZS02 220 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 RFPL4BQ6ZWI9 263 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 RTN4RL2Q86UN3 420 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 OR5L1Q8NGL2 311 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 GPX8Q8TED1 209 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 CREB3L1Q96BA8 519 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 SNRNP40Q96DI7 357 aaKnown RBP13.09□□□□□ -0.31
HIF3A-218ENST00000600383 URM1Q9BTM9 101 aaKnown RBP13.09□□□□□ -0.31
HIF3A-218ENST00000600383 CDH20Q9HBT6 801 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 EIF3KQ9UBQ5 218 aaKnown RBP13.09□□□□□ -0.31
HIF3A-218ENST00000600383 FBLN5Q9UBX5 448 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 NCOR2Q9Y618 2525 aa13.09□□□□□ -0.31
HIF3A-218ENST00000600383 CHD8Q9HCK8 2581 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 A0A0A6YYD4 124 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 LPLP06858 475 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 COX5AP20674 150 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 FUT6P51993 359 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 RSU1Q15404 277 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 ZNF260Q3ZCT1 412 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 GFRALQ6UXV0 394 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 BEND4Q6ZU67 534 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 LHFPL2Q6ZUX7 228 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 AKAP14Q86UN6 197 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 WBP1Q96G27 269 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 ASF1BQ9NVP2 202 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 CRIM1Q9NZV1 1036 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 GHRLQ9UBU3 117 aa13.08□□□□□ -0.32
HIF3A-218ENST00000600383 TLN1Q9Y490 2541 aaKnown RBP13.08□□□□□ -0.32
HIF3A-218ENST00000600383 PRRG2O14669 202 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 HTR3BO95264 441 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 CSTBP04080 98 aaKnown RBP13.07□□□□□ -0.32
HIF3A-218ENST00000600383 CHRM2P08172 466 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 TDGF1P3P51864 188 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 ATP1B3P54709 279 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 PRDX4Q13162 271 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 WDR31Q8NA23 367 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 OR4D10Q8NGI6 311 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 AQP3Q92482 292 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 RAB3CQ96E17 227 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 CPNE2Q96FN4 548 aaPredicted RBP13.07□□□□□ -0.32
HIF3A-218ENST00000600383 TAS2R8Q9NYW2 309 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 CD300LBA8K4G0 201 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 C1QTNF9BB2RNN3 333 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 SCGNO76038 276 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 CD3DP04234 171 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 CSF1P09603 554 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 C1QTNF9P0C862 333 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 TIMP3P35625 211 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 ALDH3B1P43353 468 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 ZP1P60852 638 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 P2RY6Q15077 328 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 LINC00303Q3SY05 128 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 OLFML2AQ68BL7 652 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 OR2T2Q6IF00 324 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 BHLHA15Q7RTS1 189 aaPredicted RBP13.07□□□□□ -0.32
HIF3A-218ENST00000600383 FJX1Q86VR8 437 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 DOLPP1Q86YN1 238 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 FTMTQ8N4E7 242 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 NUDCD2Q8WVJ2 157 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 CYYR1Q96J86 154 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 TINAGQ9UJW2 476 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 ALG5Q9Y673 324 aa13.07□□□□□ -0.32
HIF3A-218ENST00000600383 SULT1C2O00338 296 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 ATP6V1G1O75348 118 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 CRHP06850 196 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 CBR1P16152 277 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 HLA-DMAP28067 261 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 TMEM50BP56557 158 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 ACTBP60709 375 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 RPS27AP62979 156 aaKnown RBP13.06□□□□□ -0.32
HIF3A-218ENST00000600383 ACTG1P63261 375 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 PLAC9Q5JTB6 97 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms