RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 BBS1Q8NFJ9 593 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 NPRL2Q8WTW4 380 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 HPSE2Q8WWQ2 592 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 DNAJC9Q8WXX5 260 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 MED30Q96HR3 178 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 LYZL4Q96KX0 146 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 RAB3IPQ96QF0 476 aaPredicted RBP8.07□□□□□ -1.12
VRK3-216ENST00000599342 DCTN5Q9BTE1 182 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 MROQ9BYG7 248 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 PRRG3Q9BZD7 231 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 WDR13Q9H1Z4 485 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 TVP23BQ9NYZ1 205 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 NLKQ9UBE8 527 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 SLC25A10Q9UBX3 287 aaPredicted RBP8.07□□□□□ -1.12
VRK3-216ENST00000599342 KLHDC2Q9Y2U9 406 aa8.07□□□□□ -1.12
VRK3-216ENST00000599342 NBEAL1Q6ZS30 2694 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 A0A0U1RQV5 110 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 TMEM269A0A1B0GVZ9 245 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 ACOD1A6NK06 481 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 PSMD9O00233 223 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 TIMM23O14925 209 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 GSC2O15499 205 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 FKBP6O75344 327 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 MRPL3P09001 348 aaKnown RBP8.06□□□□□ -1.12
VRK3-216ENST00000599342 SELLP14151 372 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 NDUFB7P17568 137 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 ALOX5APP20292 161 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 PRKACGP22612 351 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 SLC2A5P22732 501 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 GABRA2P47869 451 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 TGM4P49221 684 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 GNG3P63215 75 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 SRSF4Q08170 494 aaKnown RBP8.06□□□□□ -1.12
VRK3-216ENST00000599342 ZNF829Q3KNS6 432 aaPredicted RBP8.06□□□□□ -1.12
VRK3-216ENST00000599342 FAM76BQ5HYJ3 339 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 CEP78Q5JTW2 689 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 TMEM236Q5W0B7 351 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 NCR3LG1Q68D85 454 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 DHRS7BQ6IAN0 325 aaPredicted RBP8.06□□□□□ -1.12
VRK3-216ENST00000599342 ZNF788Q6ZQV5 615 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 PIP4P2Q8N4L2 257 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 C8orf46Q8TAG6 207 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 ZNF671Q8TAW3 534 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 ITFG2Q969R8 447 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 GAFA1Q96PS6 74 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 YIPF3Q9GZM5 350 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 SLC25A19Q9HC21 320 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 PAPOLBQ9NRJ5 636 aaKnown RBP8.06□□□□□ -1.12
VRK3-216ENST00000599342 DNAJB9Q9UBS3 223 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 RNF114Q9Y508 228 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 TMEM14AQ9Y6G1 99 aa8.06□□□□□ -1.12
VRK3-216ENST00000599342 TENM1Q9UKZ4 2725 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 A0A1W2PRD5 423 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 A0A1W2PRF3 423 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 A0A1W2PRM7 423 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 OR5B21A6NL26 309 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 OR2AT4A6NND4 320 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 ZNF732B4DXR9 585 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 M0QZ24 198 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 M0R1W7 72 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 NPFFO15130 113 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 SIGLEC5O15389 551 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 KCNAB3O43448 404 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 ZNF254O75437 659 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 ACAA1P09110 424 aaPredicted RBP8.05□□□□□ -1.12
VRK3-216ENST00000599342 ATP6V1B1P15313 513 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 AMY2BP19961 511 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 RIDAP52758 137 aaKnown RBP8.05□□□□□ -1.12
VRK3-216ENST00000599342 CAPZA1P52907 286 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 HCCSP53701 268 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 CAV3P56539 151 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 RIPPLY1Q0D2K3 151 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 KLRD1Q13241 179 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 DGUOKQ16854 277 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 CEACAM21Q3KPI0 293 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 PLCXD3Q63HM9 321 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 DEGS2Q6QHC5 323 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 MOB3CQ70IA8 216 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 TRPM8Q7Z2W7 1104 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 ZNF679Q8IYX0 411 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 TMEM185AQ8NFB2 350 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 ANGPTL6Q8NI99 470 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 ASB17Q8WXJ9 295 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 CNN2Q99439 309 aaKnown RBP8.05□□□□□ -1.12
VRK3-216ENST00000599342 TEAD3Q99594 435 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 CITED1Q99966 193 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 TTTY10Q9BZA0 68 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 FGF23Q9GZV9 251 aaPredicted RBP8.05□□□□□ -1.12
VRK3-216ENST00000599342 PBOV1Q9GZY1 135 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 SEMA6AQ9H2E6 1030 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 METTL8Q9H825 291 aaKnown RBP8.05□□□□□ -1.12
VRK3-216ENST00000599342 FAM206AQ9NX38 181 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 ZNRD1Q9P1U0 126 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 ENPP5Q9UJA9 477 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 VPREB3Q9UKI3 123 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 IKZF2Q9UKS7 526 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 GTF2A1LQ9UNN4 478 aa8.05□□□□□ -1.12
VRK3-216ENST00000599342 TCRBV3S1A0A5B6 114 aa8.04□□□□□ -1.12
VRK3-216ENST00000599342 MEIOCA2RUB1 952 aa8.04□□□□□ -1.12
VRK3-216ENST00000599342 CCDC182A6NF36 153 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms