RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 HPS1Q92902 700 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 TMEM106BQ9NUM4 274 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 UFSP2Q9NUQ7 469 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 TREM2Q9NZC2 230 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 SLC7A11Q9UPY5 501 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 OTOGQ6ZRI0 2925 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 TRIM64A6NGJ6 449 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 LRRC30A6NM36 301 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 ZNF732B4DXR9 585 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 PPIHO43447 177 aaKnown RBP12.12□□□□□ -0.47
VRK3-213ENST00000597215 OCM2P0CE71 109 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 IRF2P14316 349 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 THBS2P35442 1172 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 SOX2P48431 317 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 EMX1Q04741 257 aaPredicted RBP12.12□□□□□ -0.47
VRK3-213ENST00000597215 ZNF154Q13106 437 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 GPR50Q13585 617 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 CNN3Q15417 329 aaKnown RBP12.12□□□□□ -0.47
VRK3-213ENST00000597215 MPPED2Q15777 294 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 PEG10Q86TG7 708 aaKnown RBP12.12□□□□□ -0.47
VRK3-213ENST00000597215 WDR86Q86TI4 376 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 TGIF2LYQ8IUE0 185 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 SERPINA12Q8IW75 414 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 C1orf87Q8N0U7 546 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 PARP16Q8N5Y8 322 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 ZNF420Q8TAQ5 688 aaPredicted RBP12.12□□□□□ -0.47
VRK3-213ENST00000597215 Q8TCH9 128 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 FCGR1BQ92637 280 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 TIMD4Q96H15 378 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 MGLLQ99685 303 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 BPESC1Q9GZL8 116 aa12.12□□□□□ -0.47
VRK3-213ENST00000597215 FGF23Q9GZV9 251 aaPredicted RBP12.12□□□□□ -0.47
VRK3-213ENST00000597215 TRBV5-5A0A0J9YX44 114 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 hCG_1807616A0A1W2PRN6 198 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 LRP5LA4QPB2 252 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 TRIM64BA6NI03 449 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 VWC2LB2RUY7 222 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 PMELP40967 661 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 NR4A2P43354 598 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 TPBGQ13641 420 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 UBE2V2Q15819 145 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 Q499Y3 187 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 FAM76BQ5HYJ3 339 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 DMRTC1Q5HYR2 192 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 MS4A15Q8N5U1 240 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 OR5D14Q8NGL3 314 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 OR13C5Q8NGS8 318 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 THRSPQ92748 146 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 RAB1CQ92928 201 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 TMEM106AQ96A25 262 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 OPALINQ96PE5 141 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 TLNRD1Q9H1K6 362 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 NEK6Q9HC98 313 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 C1orf123Q9NWV4 160 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 RNF7Q9UBF6 113 aa12.11□□□□□ -0.47
VRK3-213ENST00000597215 VPS13CQ709C8 3753 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 PQLC2LA1A4F0 135 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 TMEM178BH3BS89 294 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 CYB5R3P00387 301 aaPredicted RBP12.1□□□□□ -0.47
VRK3-213ENST00000597215 OCMP0CE72 109 aaPredicted RBP12.1□□□□□ -0.47
VRK3-213ENST00000597215 CPEP16870 476 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 ATF1P18846 271 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 PCMT1P22061 227 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 PRKACBP22694 351 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 FUT6P51993 359 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 RPS11P62280 158 aaKnown RBP eCLIP12.1□□□□□ -0.47
VRK3-213ENST00000597215 UBE2UQ5VVX9 321 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 LIPKQ5VXJ0 399 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 ZNF573Q86YE8 665 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 DNAAF1Q8NEP3 725 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 OR13C9Q8NGT0 318 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 TRMT10AQ8TBZ6 339 aaKnown RBP12.1□□□□□ -0.47
VRK3-213ENST00000597215 NPRL2Q8WTW4 380 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 RPL3LQ92901 407 aaKnown RBP12.1□□□□□ -0.47
VRK3-213ENST00000597215 SPSB1Q96BD6 273 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 BORCS8Q96FH0 119 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 REG4Q9BYZ8 158 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 OR51I2Q9H344 312 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 ZCCHC4Q9H5U6 513 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 ZNF696Q9H7X3 374 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 DCAF16Q9NXF7 216 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 NPTNQ9Y639 398 aa12.1□□□□□ -0.47
VRK3-213ENST00000597215 MAP1AP78559 2803 aaPredicted RBP12.09□□□□□ -0.47
VRK3-213ENST00000597215 FAM230AA0A1W2PPH8 454 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 ZNF879B4DU55 563 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 RNF223E7ERA6 249 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 H7C1Q1 480 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 CDIPTO14735 213 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 SULT1B1O43704 296 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 ALX3O95076 343 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 AZGP1P25311 298 aaKnown RBP12.09□□□□□ -0.47
VRK3-213ENST00000597215 MAPK3P27361 379 aaPredicted RBP12.09□□□□□ -0.47
VRK3-213ENST00000597215 CFHR2P36980 270 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 HNRNPA0Q13151 305 aaKnown RBP12.09□□□□□ -0.47
VRK3-213ENST00000597215 TRAM1Q15629 374 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 ARMCX4Q5H9R4 360 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 ZNF826PQ6ZT77 177 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 LHFPL2Q6ZUX7 228 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 PHC2Q8IXK0 858 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 C11orf53Q8IXP5 236 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms