RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 RFT1Q96AA3 541 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 PLK3Q9H4B4 646 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 CNTD2Q9H8S5 307 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 LIN7BQ9HAP6 207 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 ABRACLQ9P1F3 81 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 A0A0B4J203 849 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 OR5B21A6NL26 309 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 ATP1B3P54709 279 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 DYNC1I2Q13409 638 aaKnown RBP12.51□□□□□ -0.41
VRK3-212ENST00000596814 RIN1Q13671 783 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 OR8G1Q15617 311 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 FAM166AQ6J272 317 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 MZT2AQ6P582 158 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 RNF144BQ7Z419 303 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 OR5A2Q8NGI9 324 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 OR4D6Q8NGJ1 314 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 OR13G1Q8NGZ3 307 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 MICU1Q9BPX6 476 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 MRI1Q9BV20 369 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 RTL8AQ9BWD3 113 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 FGF23Q9GZV9 251 aaPredicted RBP12.51□□□□□ -0.41
VRK3-212ENST00000596814 MSL2Q9HCI7 577 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 TAAR3PQ9P1P4 343 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 COMMD3Q9UBI1 195 aa12.51□□□□□ -0.41
VRK3-212ENST00000596814 NOP16Q9Y3C1 178 aaKnown RBP12.51□□□□□ -0.41
VRK3-212ENST00000596814 ROS1P08922 2347 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 IGKV1-27A0A075B6S5 117 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.5□□□□□ -0.41
VRK3-212ENST00000596814 PLSCR5A0PG75 271 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 PQLC2LA1A4F0 135 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 MLNRO43193 412 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 PAHP00439 452 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 SNRPBP14678 240 aaKnown RBP12.5□□□□□ -0.41
VRK3-212ENST00000596814 OR3A4PP47883 348 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 MMP15P51511 669 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 GPM6AP51674 278 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 BMXP51813 675 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 P2RY14Q15391 338 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 MOGQ16653 247 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 NKPD1Q17RQ9 610 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 ZNF672Q499Z4 452 aaPredicted RBP12.5□□□□□ -0.41
VRK3-212ENST00000596814 AWAT2Q6E213 333 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 CRIP3Q6Q6R5 217 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 Q6ZR03 302 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 ACBD4Q8NC06 268 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 OR10AD1Q8NGE0 317 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 OR5D18Q8NGL1 313 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 LGALS14Q8TCE9 139 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 RNF170Q96K19 258 aa12.5□□□□□ -0.41
VRK3-212ENST00000596814 A0A1B0GWJ7 208 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 CLEC18AA5D8T8 446 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 ZNF732B4DXR9 585 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 RGS5O15539 181 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 CALCBP10092 127 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 APOBEC3AP31941 199 aaPredicted RBP12.49□□□□□ -0.41
VRK3-212ENST00000596814 SERPINF1P36955 418 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 RANBP1P43487 201 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 GNG3P63215 75 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 CLEC18BQ6UXF7 455 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 CLEC18CQ8NCF0 446 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 LILRB1Q8NHL6 650 aaPredicted RBP12.49□□□□□ -0.41
VRK3-212ENST00000596814 SLC25A28Q96A46 364 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 CYSLTR2Q9NS75 346 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 CISD1Q9NZ45 108 aaKnown RBP12.49□□□□□ -0.41
VRK3-212ENST00000596814 MRPS28Q9Y2Q9 187 aaKnown RBP12.49□□□□□ -0.41
VRK3-212ENST00000596814 PEX16Q9Y5Y5 336 aa12.49□□□□□ -0.41
VRK3-212ENST00000596814 ZSCAN5BA6NJL1 495 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 H0YL77 283 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 CTDSP2O14595 271 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 S100A5P33763 92 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 POU3F4P49335 361 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 EVX1P49640 407 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 SCAND1P57086 179 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 ZP1P60852 638 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 DAZAP2Q15038 168 aaPredicted RBP12.48□□□□□ -0.41
VRK3-212ENST00000596814 ANGPTL5Q86XS5 388 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 SPERTQ8NA61 448 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 OR51D1Q8NGF3 324 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 OR6Q1Q8NGQ2 317 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 TBC1D15Q8TC07 691 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 TNFAIP8L1Q8WVP5 186 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 GTF3AQ92664 365 aaKnown RBP12.48□□□□□ -0.41
VRK3-212ENST00000596814 FAM3DQ96BQ1 224 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 DHRS9Q9BPW9 319 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 NKIRAS2Q9NYR9 191 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 OR5V1Q9UGF6 321 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 SPATA2Q9UM82 520 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 ETV7Q9Y603 341 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 ABCA4P78363 2273 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 ICE1Q9Y2F5 2266 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 LOC100289279A0A1B0GTE1 492 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 BPNT1O95861 308 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 PLATP00750 562 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 ARSBP15848 533 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 PTGFRP43088 359 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 ALDH3B1P43353 468 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 HAAOP46952 286 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 CAPZA1P52907 286 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 GLIPR1L1Q6UWM5 242 aa12.48□□□□□ -0.41
VRK3-212ENST00000596814 LAX1Q8IWV1 398 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms