RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 IL32P24001 234 aa12.52□□□□□ -0.4
RANBP3-229ENST00000592771 LSM6P62312 80 aaKnown RBP12.52□□□□□ -0.4
RANBP3-229ENST00000592771 ANGPTL5Q86XS5 388 aa12.52□□□□□ -0.4
RANBP3-229ENST00000592771 OR2AJ1Q8NGZ0 328 aa12.52□□□□□ -0.4
RANBP3-229ENST00000592771 OR4K15Q8NH41 348 aa12.52□□□□□ -0.4
RANBP3-229ENST00000592771 OR14L1PQ8NHC6 308 aa12.52□□□□□ -0.4
RANBP3-229ENST00000592771 NUDCD2Q8WVJ2 157 aa12.52□□□□□ -0.4
RANBP3-229ENST00000592771 SEC22AQ96IW7 307 aa12.52□□□□□ -0.4
RANBP3-229ENST00000592771 SELENOIQ9C0D9 397 aa12.52□□□□□ -0.4
RANBP3-229ENST00000592771 CHMP1AQ9HD42 196 aaPredicted RBP12.52□□□□□ -0.4
RANBP3-229ENST00000592771 PARD6AQ9NPB6 346 aa12.52□□□□□ -0.4
RANBP3-229ENST00000592771 MYEF2Q9P2K5 600 aaKnown RBP12.52□□□□□ -0.4
RANBP3-229ENST00000592771 FOXD3Q9UJU5 478 aaPredicted RBP12.52□□□□□ -0.4
RANBP3-229ENST00000592771 KCNK7Q9Y2U2 307 aa12.52□□□□□ -0.4
RANBP3-229ENST00000592771 MUC6Q6W4X9 2439 aa12.52□□□□□ -0.4
RANBP3-229ENST00000592771 IGHV3-15A0A0B4J1V0 119 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 OR2AT4A6NND4 320 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 NPIPA2E9PIF3 369 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 NPIPA3F8WFD2 350 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 NEURL1O76050 574 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 TPT1P13693 172 aaKnown RBP12.52□□□□□ -0.41
RANBP3-229ENST00000592771 GABREP78334 506 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 TRIP6Q15654 476 aaKnown RBP12.52□□□□□ -0.41
RANBP3-229ENST00000592771 DCAF10Q5QP82 559 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 PHYHD1Q5SRE7 291 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 GVQW1Q8N7I0 195 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 INTS12Q96CB8 462 aaKnown RBP12.52□□□□□ -0.41
RANBP3-229ENST00000592771 IP6K3Q96PC2 410 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 OCSTAMPQ9BR26 566 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 MS4A7Q9GZW8 240 aaPredicted RBP12.52□□□□□ -0.41
RANBP3-229ENST00000592771 LPAR5Q9H1C0 372 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 RAB18Q9NP72 206 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 ASH2LQ9UBL3 628 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 GHRLQ9UBU3 117 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 POLR1DQ9Y2S0 133 aa12.52□□□□□ -0.41
RANBP3-229ENST00000592771 STMND1H3BQB6 276 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 DNASE2O00115 360 aaPredicted RBP12.51□□□□□ -0.41
RANBP3-229ENST00000592771 CCSO14618 274 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 SSX5O60225 188 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 GNB3P16520 340 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 VAMP1P23763 118 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 ZNF169Q14929 603 aaPredicted RBP12.51□□□□□ -0.41
RANBP3-229ENST00000592771 OR52W1Q6IF63 320 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 CLRN3Q8NCR9 226 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 SLC30A7Q8NEW0 376 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 OR5AP2Q8NGF4 316 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 OR56B1Q8NGI3 324 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 PIK3IP1Q96FE7 263 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 LRRC46Q96FV0 321 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 URM1Q9BTM9 101 aaKnown RBP12.51□□□□□ -0.41
RANBP3-229ENST00000592771 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.51□□□□□ -0.41
RANBP3-229ENST00000592771 LRFN1Q9P244 771 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 MBD2Q9UBB5 411 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 GPR132Q9UNW8 380 aa12.51□□□□□ -0.41
RANBP3-229ENST00000592771 MRPS28Q9Y2Q9 187 aaKnown RBP12.51□□□□□ -0.41
RANBP3-229ENST00000592771 EP300Q09472 2414 aaPredicted RBP12.51□□□□□ -0.41
RANBP3-229ENST00000592771 ATP6V1G2-DDX39BF2Z307 99 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 LYL1P12980 280 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 HIST1H1DP16402 221 aaKnown RBP12.5□□□□□ -0.41
RANBP3-229ENST00000592771 MSR1P21757 451 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 CTSSP25774 331 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 GFRA1P56159 465 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 ARL6IP1Q15041 203 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 LRRC37A5PQ49AS3 106 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 FAM74A1Q5RGS3 127 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 ABHD17BQ5VST6 288 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 ABLIM2Q6H8Q1 611 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 DOK3Q7L591 496 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 C20orf196Q8IYI0 205 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 ZNF101Q8IZC7 436 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 BPIFCQ8NFQ6 507 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 OR13C9Q8NGT0 318 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 NABP1Q96AH0 204 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 CMBLQ96DG6 245 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 RAB3CQ96E17 227 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 ZNF75AQ96N20 296 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 NKX6-2Q9C056 277 aaPredicted RBP12.5□□□□□ -0.41
RANBP3-229ENST00000592771 TMEM100Q9NV29 134 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 IL17BQ9UHF5 180 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 BOKQ9UMX3 212 aaPredicted RBP12.5□□□□□ -0.41
RANBP3-229ENST00000592771 MED13Q9UHV7 2174 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 C5orf51A6NDU8 294 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 FAM25EA8MYX2 175 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 RER1O15258 196 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 DHHO43323 396 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 LRP3O75074 770 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 SFT2D2O95562 160 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 AKR1C4P17516 323 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 FPR2P25090 351 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 CARD18P57730 90 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 GRB2P62993 217 aaKnown RBP12.5□□□□□ -0.41
RANBP3-229ENST00000592771 HIST1H3AP68431 136 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 AIMP2Q13155 320 aaKnown RBP12.5□□□□□ -0.41
RANBP3-229ENST00000592771 ENDOGQ14249 297 aaKnown RBP12.5□□□□□ -0.41
RANBP3-229ENST00000592771 WIPI1Q5MNZ9 446 aaPredicted RBP12.5□□□□□ -0.41
RANBP3-229ENST00000592771 HIST2H3PS2Q5TEC6 136 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 ELP2Q6IA86 826 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 RTL6Q6ICC9 239 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 GLIPR1L1Q6UWM5 242 aa12.5□□□□□ -0.41
RANBP3-229ENST00000592771 HIST2H3AQ71DI3 136 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms