RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 KHDRBS3O75525 346 aaKnown RBP6.29□□□□□ -1.4
VMP1-213ENST00000591877 PPP1R3DO95685 299 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 IGLV2-14P01704 120 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 MSMBP08118 114 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 CD55P08174 381 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 HNF1AP20823 631 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 GUCA1AP43080 201 aaPredicted RBP6.29□□□□□ -1.4
VMP1-213ENST00000591877 GSSP48637 474 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 ERFP50548 548 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 LSM6P62312 80 aaKnown RBP6.29□□□□□ -1.4
VMP1-213ENST00000591877 HIST1H3AP68431 136 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 MOGQ16653 247 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 MEP1BQ16820 701 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 RSPO1Q2MKA7 263 aaPredicted RBP6.29□□□□□ -1.4
VMP1-213ENST00000591877 HIST2H3PS2Q5TEC6 136 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 DPY19L2P2Q6ZN68 376 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 HIST2H3AQ71DI3 136 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 C1orf174Q8IYL3 243 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 TMEM186Q96B77 213 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 CDRT15Q96T59 188 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 OR52D1Q9H346 318 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 RERGLQ9H628 205 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 OPA3Q9H6K4 179 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 ZNF665Q9H7R5 613 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 MAP6D1Q9H9H5 199 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 ELOVL3Q9HB03 270 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 HIF1ANQ9NWT6 349 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 TAS2R1Q9NYW7 299 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 AURKCQ9UQB9 309 aa6.29□□□□□ -1.4
VMP1-213ENST00000591877 CLDN25C9JDP6 229 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 H3BSA7 217 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 ARPC3O15145 178 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 RER1O15258 196 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 GYG2O15488 501 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 PLPP2O43688 288 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 GADD45GO95257 159 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 IGHV2-5P01817 119 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 VPREB1P12018 145 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 KITLGP21583 273 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 HTR5AP47898 357 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 ARHGDIAP52565 204 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 ELF3P78545 371 aaPredicted RBP6.28□□□□□ -1.4
VMP1-213ENST00000591877 SPIBQ01892 262 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 SCRN3Q0VDG4 424 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 AQP6Q13520 282 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 RIPK1Q13546 671 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 HFEQ30201 348 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 RFX4Q33E94 735 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 MTX3Q5HYI7 312 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 SAMD4BQ5PRF9 694 aaKnown RBP6.28□□□□□ -1.4
VMP1-213ENST00000591877 HIST2H2BDQ6DRA6 164 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 C1orf94Q6P1W5 598 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 SMARCD3Q6STE5 483 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 PET117Q6UWS5 81 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 UNQ6126/PRO20091Q6UXV3 157 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 ADCK1Q86TW2 530 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 C10orf67Q8IYJ2 551 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 DEFB107AQ8IZN7 70 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 OR6V1Q8N148 313 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 OR1F12Q8NHA8 337 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 CCL17Q92583 94 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 MCUR1Q96AQ8 359 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 HAVCR1Q96D42 359 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 CMBLQ96DG6 245 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 SAMD8Q96LT4 415 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 NSMCE2Q96MF7 247 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 ERMAPQ96PL5 475 aaPredicted RBP6.28□□□□□ -1.4
VMP1-213ENST00000591877 NMNAT3Q96T66 252 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 C19orf24Q9BVV8 132 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 IL1RAPQ9NPH3 570 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 NDE1Q9NXR1 346 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 PLEK2Q9NYT0 353 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 PURGQ9UJV8 347 aaKnown RBP6.28□□□□□ -1.4
VMP1-213ENST00000591877 B9D1Q9UPM9 204 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 GRIP1Q9Y3R0 1128 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 LHFPL6Q9Y693 200 aa6.28□□□□□ -1.4
VMP1-213ENST00000591877 PLSCR5A0PG75 271 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 TIMM8AO60220 97 aaPredicted RBP6.27□□□□□ -1.41
VMP1-213ENST00000591877 OR10H3O60404 316 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 GMNNO75496 209 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 BAG2O95816 211 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 FABP3P05413 133 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 HIST1H1CP16403 213 aaKnown RBP6.27□□□□□ -1.41
VMP1-213ENST00000591877 ITGA2P17301 1181 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 ATP6V1B2P21281 511 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 RRM2P31350 389 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 SRP14P37108 136 aaKnown RBP6.27□□□□□ -1.41
VMP1-213ENST00000591877 SMIM11AP58511 58 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 TNFAIP6P98066 277 aaPredicted RBP6.27□□□□□ -1.41
VMP1-213ENST00000591877 KRTAP27-1Q3LI81 207 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 ACSM5Q6NUN0 579 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 LEG1Q6P5S2 330 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 CORO6Q6QEF8 472 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 ARL9Q6T311 187 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 ZNF66Q6ZN08 573 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 ZDHHC21Q8IVQ6 265 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 RFLNBQ8N5W9 214 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 ZBTB8BQ8NAP8 495 aaPredicted RBP6.27□□□□□ -1.41
VMP1-213ENST00000591877 NPEPL1Q8NDH3 523 aa6.27□□□□□ -1.41
VMP1-213ENST00000591877 SLC26A10Q8NG04 563 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms