RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 EDN3P14138 238 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 RNF133Q8WVZ7 376 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 STRAPQ9Y3F4 350 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 SCN5AQ14524 2016 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 IFI6P09912 130 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 CD37P11049 281 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 MECP2P51608 486 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 DSCR4P56555 118 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 A0A096LPE4 126 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 A0A1W2PPZ6 126 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 GPR31O00270 319 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 PNPP00491 289 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 HPNP05981 417 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 PDCD1Q15116 288 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 HAGHQ16775 308 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 SLC25A26Q70HW3 274 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 C12orf57Q99622 126 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 ALX4Q9H161 411 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 RCL1Q9Y2P8 373 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 SLCO1B1Q9Y6L6 691 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 KIR2DS1A0A191URI9 304 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 KIR2DS4P43632 304 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 KIR2DS1Q14954 304 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 MOGAT2Q3SYC2 334 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 COL13A1Q5TAT6 717 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 OR2AE1Q8NHA4 323 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 FAAP24Q9BTP7 215 aa15.2■□□□□ 0.02
SMARCA4-215ENST00000590574 CEBPZOSA8MTT3 80 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 CST4P01036 141 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 BTCP35070 178 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 NDUFA6P56556 154 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 TRIM61Q5EBN2 209 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 OR5AP2Q8NGF4 316 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 INTS12Q96CB8 462 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 NMES1Q9C002 83 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 MAGT1Q9H0U3 335 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 FIGNL2A6NMB9 653 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 GP1BAP07359 652 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 H2BFSP57053 126 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 PPIAP62937 165 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 HBG1P69891 147 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 HBG2P69892 147 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 MICBQ29980 383 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 OR10J5Q8NHC4 309 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 SDSLQ96GA7 329 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 KCNAB3O43448 404 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 ADAM19Q9H013 955 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 CRLF2Q9HC73 371 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 ZFP92A6NM28 416 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 DXOO77932 396 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 OR2C1O95371 312 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 STK11Q15831 433 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 TMEM255AQ5JRV8 349 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 C12orf49Q9H741 205 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 TNFSF18Q9UNG2 199 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 MTCH2Q9Y6C9 303 aa15.19■□□□□ 0.02
SMARCA4-215ENST00000590574 C5orf49A4QMS7 147 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 FAM166BA8MTA8 275 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 YKT6O15498 198 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 FZD5Q13467 585 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 MSMO1Q15800 293 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 HIST2H3AQ71DI3 136 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 FBXL14Q8N1E6 418 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 D2HGDHQ8N465 521 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 SPEM1Q8N4L4 309 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 WDSUB1Q8N9V3 476 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 PECRQ9BY49 303 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 FANCFQ9NPI8 374 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 RNF212BA8MTL3 300 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 CBR3O75828 277 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 CLDN1O95832 211 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 GSK3AP49840 483 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 TGFBR3Q03167 851 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 FAM219AQ8IW50 185 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 TDHQ8IZJ6 230 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 OR1F12Q8NHA8 337 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 MITD1Q8WV92 249 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 UCK1Q9HA47 277 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 OR6C6A6NF89 314 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 J3QRE1 110 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 HIST2H3PS2Q5TEC6 136 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 BRICD5Q6PL45 260 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 CARFQ8N187 725 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 OR6X1Q8NH79 312 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 MALSU1Q96EH3 234 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 THOC3Q96J01 351 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 SCN2AQ99250 2005 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 MFSD2BA6NFX1 497 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 ZNF724A8MTY0 619 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 OR2B8PP59922 312 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 RPS4XP62701 263 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 RHBDD2Q6NTF9 364 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 KCNE4Q8WWG9 221 aa15.18■□□□□ 0.02
SMARCA4-215ENST00000590574 GCH1P30793 250 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 SELENOVP59797 346 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 RPS11P62280 158 aaKnown RBP eCLIP15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 ZNF660Q6AZW8 331 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 BPHLQ86WA6 291 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 NUBPLQ8TB37 319 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 RGP1Q92546 391 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms