RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 A6NLC8 198 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 TMEM210A6NLX4 147 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 LRRC30A6NM36 301 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 ZNF732B4DXR9 585 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 CLDN25C9JDP6 229 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 TNFAIP8O95379 198 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 SLC25A16P16260 332 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 GPR6P46095 362 aaPredicted RBP16.16■□□□□ 0.18
DDX39A-214ENST00000590556 SOX2P48431 317 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 GNG3P63215 75 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 YIF1BQ5BJH7 314 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 SPNS3Q6ZMD2 512 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 UTS2BQ765I0 119 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 WDR86Q86TI4 376 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 UFD1Q92890 307 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 HPS1Q92902 700 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 TECTBQ96PL2 329 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 MGLLQ99685 303 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 FGF23Q9GZV9 251 aaPredicted RBP16.16■□□□□ 0.18
DDX39A-214ENST00000590556 C1orf123Q9NWV4 160 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 SLC7A11Q9UPY5 501 aa16.16■□□□□ 0.18
DDX39A-214ENST00000590556 VWC2LB2RUY7 222 aa16.15■□□□□ 0.18
DDX39A-214ENST00000590556 CD2P06729 351 aa16.15■□□□□ 0.18
DDX39A-214ENST00000590556 OCM2P0CE71 109 aa16.15■□□□□ 0.18
DDX39A-214ENST00000590556 IRF2P14316 349 aa16.15■□□□□ 0.18
DDX39A-214ENST00000590556 PMELP40967 661 aa16.15■□□□□ 0.18
DDX39A-214ENST00000590556 NR4A2P43354 598 aa16.15■□□□□ 0.18
DDX39A-214ENST00000590556 MLLT11Q13015 90 aaPredicted RBP16.15■□□□□ 0.18
DDX39A-214ENST00000590556 HNRNPA0Q13151 305 aaKnown RBP16.15■□□□□ 0.18
DDX39A-214ENST00000590556 GPR50Q13585 617 aa16.15■□□□□ 0.18
DDX39A-214ENST00000590556 UBE2V2Q15819 145 aa16.15■□□□□ 0.18
DDX39A-214ENST00000590556 SERPINA12Q8IW75 414 aa16.15■□□□□ 0.18
DDX39A-214ENST00000590556 OR13C5Q8NGS8 318 aa16.15■□□□□ 0.18
DDX39A-214ENST00000590556 Q8TCH9 128 aa16.15■□□□□ 0.18
DDX39A-214ENST00000590556 DCAF16Q9NXF7 216 aa16.15■□□□□ 0.18
DDX39A-214ENST00000590556 TRBV5-5A0A0J9YX44 114 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 ATF1P18846 271 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 RBMXP38159 391 aaKnown RBP16.14■□□□□ 0.17
DDX39A-214ENST00000590556 RPS11P62280 158 aaKnown RBP eCLIP16.14■□□□□ 0.17
DDX39A-214ENST00000590556 ZNF154Q13106 437 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 TPBGQ13641 420 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 CNN3Q15417 329 aaKnown RBP16.14■□□□□ 0.17
DDX39A-214ENST00000590556 ZNF181Q2M3W8 571 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 Q499Y3 187 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 FAM76BQ5HYJ3 339 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 LIPKQ5VXJ0 399 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 ZNF826PQ6ZT77 177 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 PEG10Q86TG7 708 aaKnown RBP16.14■□□□□ 0.17
DDX39A-214ENST00000590556 C11orf53Q8IXP5 236 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 MS4A15Q8N5U1 240 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 PARP16Q8N5Y8 322 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 OR5D14Q8NGL3 314 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 NPRL2Q8WTW4 380 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 RAB1CQ92928 201 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 TIMD4Q96H15 378 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 OPALINQ96PE5 141 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 REG4Q9BYZ8 158 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 BPESC1Q9GZL8 116 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 ZCCHC4Q9H5U6 513 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 RNF7Q9UBF6 113 aa16.14■□□□□ 0.17
DDX39A-214ENST00000590556 FAM230AA0A1W2PPH8 454 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 hCG_1807616A0A1W2PRN6 198 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 PQLC2LA1A4F0 135 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 LRP5LA4QPB2 252 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 RNF223E7ERA6 249 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 TMEM178BH3BS89 294 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 CYB5R3P00387 301 aaPredicted RBP16.13■□□□□ 0.17
DDX39A-214ENST00000590556 OCMP0CE72 109 aaPredicted RBP16.13■□□□□ 0.17
DDX39A-214ENST00000590556 CPEP16870 476 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 PCMT1P22061 227 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 FUT6P51993 359 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 AVPI1Q5T686 147 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 UBE2UQ5VVX9 321 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 C1orf87Q8N0U7 546 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 SCCPDHQ8NBX0 429 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 OR13C9Q8NGT0 318 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 TRMT10AQ8TBZ6 339 aaKnown RBP16.13■□□□□ 0.17
DDX39A-214ENST00000590556 FCGR1BQ92637 280 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 RPL3LQ92901 407 aaKnown RBP16.13■□□□□ 0.17
DDX39A-214ENST00000590556 TMEM106AQ96A25 262 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 TMED9Q9BVK6 235 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 TLNRD1Q9H1K6 362 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 OR51I2Q9H344 312 aa16.13■□□□□ 0.17
DDX39A-214ENST00000590556 FLNAP21333 2647 aaKnown RBP16.13■□□□□ 0.17
DDX39A-214ENST00000590556 VPS13CQ709C8 3753 aa16.12■□□□□ 0.17
DDX39A-214ENST00000590556 CDIPTO14735 213 aa16.12■□□□□ 0.17
DDX39A-214ENST00000590556 PRKACBP22694 351 aa16.12■□□□□ 0.17
DDX39A-214ENST00000590556 ARMCX4Q5H9R4 360 aa16.12■□□□□ 0.17
DDX39A-214ENST00000590556 ZNF573Q86YE8 665 aa16.12■□□□□ 0.17
DDX39A-214ENST00000590556 TSPAN14Q8NG11 270 aa16.12■□□□□ 0.17
DDX39A-214ENST00000590556 OR14A2Q96R54 314 aa16.12■□□□□ 0.17
DDX39A-214ENST00000590556 NEK6Q9HC98 313 aa16.12■□□□□ 0.17
DDX39A-214ENST00000590556 WIPI2Q9Y4P8 454 aa16.12■□□□□ 0.17
DDX39A-214ENST00000590556 NPTNQ9Y639 398 aa16.12■□□□□ 0.17
DDX39A-214ENST00000590556 A0A087WXM4 84 aa16.11■□□□□ 0.17
DDX39A-214ENST00000590556 IGKV1-9A0A0C4DH69 117 aa16.11■□□□□ 0.17
DDX39A-214ENST00000590556 ZNF879B4DU55 563 aa16.11■□□□□ 0.17
DDX39A-214ENST00000590556 H7C1Q1 480 aa16.11■□□□□ 0.17
DDX39A-214ENST00000590556 USF1P22415 310 aaPredicted RBP16.11■□□□□ 0.17
DDX39A-214ENST00000590556 AZGP1P25311 298 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms