RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 CPNE4Q96A23 557 aaPredicted RBP12.87□□□□□ -0.35
RETREG3-208ENST00000589797 MAP6Q96JE9 813 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 FAM173AQ9BQD7 235 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 ZNF426Q9BUY5 554 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 SUCNR1Q9BXA5 334 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 BCO1Q9HAY6 547 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 SLC22A20A6NK97 555 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 KLK10O43240 276 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 RFPL3SP0C7P2 107 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 VSIG8P0DPA2 414 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 GAS1P54826 345 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 C19orf48Q6RUI8 117 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 DLL4Q9NR61 685 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 USF3Q68DE3 2245 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 TRGV5A0A0B4J1U4 118 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 ANKRD20A5PA0PJZ0 165 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 K7EPK0 472 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 WDR1O75083 606 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 ADAP1O75689 374 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 RAB6AP20340 208 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 SRD5A2P31213 254 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 FAM71E2Q8N5Q1 922 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 MOB1AQ9H8S9 216 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 SCPEP1Q9HB40 452 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 TRAV39A0A0B4J263 110 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 PRR19A6NJB7 356 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 PLA1AQ53H76 456 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 PAN3Q58A45 887 aaKnown RBP12.86□□□□□ -0.35
RETREG3-208ENST00000589797 DEGS2Q6QHC5 323 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 EXD3Q8N9H8 876 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 KCNE4Q8WWG9 221 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 SEH1LQ96EE3 360 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.86□□□□□ -0.35
RETREG3-208ENST00000589797 BPNT1O95861 308 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 CDCP2Q5VXM1 449 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 TCTE3Q8IZS6 198 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 OR5T1Q8NG75 326 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 TERB2Q8NHR7 220 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 HDHD3Q9BSH5 251 aaPredicted RBP12.86□□□□□ -0.35
RETREG3-208ENST00000589797 MAGT1Q9H0U3 335 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.86□□□□□ -0.353e-8■■■■□ 20.4
RETREG3-208ENST00000589797 NOTCH3Q9UM47 2321 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 PRR14LQ5THK1 2151 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 AQP7P3A6NL99 342 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 TO15178 435 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 GIPP09681 153 aaPredicted RBP12.86□□□□□ -0.35
RETREG3-208ENST00000589797 ASCL1P50553 236 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 EDDM3BP56851 147 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 DCAF10Q5QP82 559 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 TSPO2Q5TGU0 170 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 GPR157Q5UAW9 335 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 PMS2P1A4D2B8 440 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 TUSC2O75896 110 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 PDGFAP04085 211 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 RAB2AP61019 212 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 TSC22D1Q15714 1073 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 AADACL3Q5VUY0 350 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 WDSUB1Q8N9V3 476 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 CCDC71LQ8N9Z2 235 aa12.86□□□□□ -0.35
RETREG3-208ENST00000589797 HEATR1Q9H583 2144 aaKnown RBP12.85□□□□□ -0.35
RETREG3-208ENST00000589797 IGHV1-45A0A0A0MS14 117 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 ICMTO60725 284 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 DHRS3O75911 302 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 UBBP0CG47 229 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 CA6P23280 308 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 MMP16P51512 607 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 KLF9Q13886 244 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-208ENST00000589797 GGTLC2Q14390 218 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 Q5BKY6 102 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 ZNF766Q5HY98 468 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 MUCL1Q96DR8 90 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 ZNF837Q96EG3 531 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-208ENST00000589797 GPX7Q96SL4 187 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-208ENST00000589797 TMEM231Q9H6L2 316 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 CA10Q9NS85 328 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 GLS2Q9UI32 602 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 RNF150Q9ULK6 438 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 CRYZL1O95825 349 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 KCNK17Q96T54 332 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 TSPAN15O95858 294 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 TPT1P13693 172 aaKnown RBP12.85□□□□□ -0.35
RETREG3-208ENST00000589797 EFNB1P98172 346 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 MC2RQ01718 297 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 PLAURQ03405 335 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 HLXQ14774 488 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-208ENST00000589797 PCOLCEQ15113 449 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 LYPD8Q6UX82 237 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 SCGB1C1Q8TD33 95 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 MS4A3Q96HJ5 214 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 NMNAT2Q9BZQ4 307 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 FLVCR1Q9Y5Y0 555 aa12.85□□□□□ -0.35
RETREG3-208ENST00000589797 MED19A0JLT2 244 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-208ENST00000589797 TRIM64BA6NI03 449 aa12.84□□□□□ -0.35
RETREG3-208ENST00000589797 HSPB2A8KAH6 182 aa12.84□□□□□ -0.35
RETREG3-208ENST00000589797 NKX2-8O15522 239 aa12.84□□□□□ -0.35
RETREG3-208ENST00000589797 MED6O75586 246 aa12.84□□□□□ -0.35
RETREG3-208ENST00000589797 IGHV3-13P01766 116 aa12.84□□□□□ -0.35
RETREG3-208ENST00000589797 IGHV3-7P01780 117 aa12.84□□□□□ -0.35
RETREG3-208ENST00000589797 HIST1H1DP16402 221 aaKnown RBP12.84□□□□□ -0.35
RETREG3-208ENST00000589797 SOX8P57073 446 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms