RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 GNG3P63215 75 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 MAB21L1Q13394 359 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 TESK1Q15569 626 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 GDPGP1Q6ZNW5 385 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 CELF2-AS1Q8N7Q2 184 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 OR51A2Q8NGJ7 313 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 ITLN1Q8WWA0 313 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 RPL3LQ92901 407 aaKnown RBP12.88□□□□□ -0.35
ATG4D-211ENST00000589753 BORCS8Q96FH0 119 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 MEGF10Q96KG7 1140 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 FGF23Q9GZV9 251 aaPredicted RBP12.88□□□□□ -0.35
ATG4D-211ENST00000589753 SLITRK2Q9H156 845 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 SAP30LQ9HAJ7 183 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 PLEKHA6Q9Y2H5 1048 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 GSTK1Q9Y2Q3 226 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 ROS1P08922 2347 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 LOC100289279A0A1B0GTE1 492 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 FAM230AA0A1W2PPH8 454 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 PQLC2LA1A4F0 135 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 TMEM210A6NLX4 147 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 ZNF732B4DXR9 585 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 MAGEB3O15480 346 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 MAS1P04201 325 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 GRPP07492 148 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 HCKP08631 526 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 TNFRSF1AP19438 455 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 BDKRB2P30411 391 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 BLMHQ13867 455 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 GPR107Q5VW38 600 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 LHFPL2Q6ZUX7 228 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 ANKRD13BQ86YJ7 626 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 DNAAF1Q8NEP3 725 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 NEU4Q8WWR8 484 aaPredicted RBP12.87□□□□□ -0.35
ATG4D-211ENST00000589753 LURAP1Q96LR2 239 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 CENPOQ9BU64 300 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 TMEM138Q9NPI0 162 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 DSCAMO60469 2012 aa12.87□□□□□ -0.35
ATG4D-211ENST00000589753 DCHS2Q6V1P9 2916 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 IGHV3-64DA0A0J9YX35 117 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 NCR1O76036 304 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 PTBP3O95758 552 aaKnown RBP12.86□□□□□ -0.35
ATG4D-211ENST00000589753 ALDOBP05062 364 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 MYL9P24844 172 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 DNASE1P24855 282 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 RBP2P50120 134 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 ATP1B3P54709 279 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 SPRNQ5BIV9 151 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 FAM76BQ5HYJ3 339 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 PRAMEF6Q5VXH4 476 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 WDR86Q86TI4 376 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 CLVS1Q8IUQ0 354 aaPredicted RBP12.86□□□□□ -0.35
ATG4D-211ENST00000589753 KCTD7Q96MP8 289 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 NAA50Q9GZZ1 169 aaKnown RBP12.86□□□□□ -0.35
ATG4D-211ENST00000589753 SNTG1Q9NSN8 517 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 ARFGEF3Q5TH69 2177 aa12.86□□□□□ -0.35
ATG4D-211ENST00000589753 PTPN13Q12923 2485 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 TRAV1-2A0A0B4J238 106 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 LRP5LA4QPB2 252 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 MEGF11A6BM72 1044 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 GABARAPO95166 117 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 F12P00748 615 aaPredicted RBP12.85□□□□□ -0.35
ATG4D-211ENST00000589753 HPXP02790 462 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 GATA4P43694 442 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 HAAOP46952 286 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 EFNA4P52798 201 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 MTCP1P56278 107 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 LSM3P62310 102 aaKnown RBP12.85□□□□□ -0.35
ATG4D-211ENST00000589753 ZNF154Q13106 437 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 MPPED2Q15777 294 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 DDI2Q5TDH0 399 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 SLC16A12Q6ZSM3 486 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 LRRTM1Q86UE6 522 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 ZNF573Q86YE8 665 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 NKAIN3Q8N8D7 197 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 OR52N4Q8NGI2 321 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 ERGIC1Q969X5 290 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 CPNE2Q96FN4 548 aaPredicted RBP12.85□□□□□ -0.35
ATG4D-211ENST00000589753 SPACA5Q96QH8 159 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 OR51I2Q9H344 312 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 RNF167Q9H6Y7 350 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 FN3KRPQ9HA64 309 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 UFSP2Q9NUQ7 469 aa12.85□□□□□ -0.35
ATG4D-211ENST00000589753 ZNF701Q9NV72 531 aaPredicted RBP12.85□□□□□ -0.35
ATG4D-211ENST00000589753 IGKV1-27A0A075B6S5 117 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 A6NLC8 198 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 PDCD5O14737 125 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 NDUFS7O75251 213 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 PAX1P15863 534 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 ADRA2CP18825 462 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 MTNR1BP49286 362 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 KISS1Q15726 138 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 HAGHLQ6PII5 290 aaPredicted RBP12.84□□□□□ -0.35
ATG4D-211ENST00000589753 MOGAT3Q86VF5 341 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 SCCPDHQ8NBX0 429 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 NINJ1Q92982 152 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 GPER1Q99527 375 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 TLNRD1Q9H1K6 362 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 GCM1Q9NP62 436 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 BEX4Q9NWD9 120 aaPredicted RBP12.84□□□□□ -0.35
ATG4D-211ENST00000589753 PPP1R3CQ9UQK1 317 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms