RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 HOXD4P09016 255 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 SEC11BP0C7V7 166 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 FCER1GP30273 86 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 IL24Q13007 206 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 C16orf52Q8NHV5 167 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 FAM3CQ92520 227 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 NR0B2Q15466 257 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 COX19Q49B96 90 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 OR2A1Q8NGT9 310 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 EXTL1Q92935 676 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 RTL8AQ9BWD3 113 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 THAP10Q9P2Z0 257 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 LIPGQ9Y5X9 500 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 FAM24AA6NFZ4 105 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 NHLRC3Q5JS37 347 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 JMJD6Q6NYC1 403 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 CLEC18BQ6UXF7 455 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 UBE3DQ7Z6J8 389 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 OR10C1Q96KK4 312 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 TAAR6Q96RI8 345 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 H3BP45 60 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 RRP8O43159 456 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 ADAP1O75689 374 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 CTSDP07339 412 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 CD1CP29017 333 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 SSR4P51571 173 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 CDC20BQ86Y33 519 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 ATOH1Q92858 354 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 OXGR1Q96P68 337 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 NEU3Q9UQ49 428 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 TRAV34A0A0B4J273 112 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 TLCD2A6NGC4 264 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 HPP00738 406 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 CT45A10P0DMU9 189 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 GJA4P35212 333 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 TNFRSF4P43489 277 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 ASCL1P50553 236 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 ERVS71-1P61550 626 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 COL19A1Q14993 1142 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 PRAMEF20Q5VT98 475 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 NRSN2Q9GZP1 204 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 PISDQ9UG56 409 aa13.11□□□□□ -0.31
SMARCA4-214ENST00000589677 TNFRSF10CO14798 259 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 GPR37O15354 613 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 OR7C2O60412 319 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 EIF3GO75821 320 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 COL5A1-AS1Q5SY13 56 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 STUMQ69YW2 141 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 BAHD1Q8TBE0 780 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 MMP25Q9NPA2 562 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 POLDIP2Q9Y2S7 368 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 YIF1AO95070 293 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 CNN1P51911 297 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 RUNX2Q13950 521 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 FAM78BQ5VT40 261 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 MRPS24Q96EL2 167 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 NEIL1Q96FI4 390 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 ZNF764Q96H86 408 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 MS4A3Q96HJ5 214 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 CCDC74BQ96LY2 380 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 FAM173AQ9BQD7 235 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 ANGPTL4Q9BY76 406 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 HCSTQ9UBK5 93 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 PRSS50Q9UI38 385 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 KIAA1324LA8MWY0 1029 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 HRASP01112 189 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 KRASP01116 189 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 TBXA2RP21731 343 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 MRPL43Q8N983 215 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 GSX1Q9H4S2 264 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 SLC2A9Q9NRM0 540 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 TEX50A0A1B0GTY4 177 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 IDSB3KWA1 339 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 ICOSLGO75144 302 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 CRISP2P16562 243 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 KCNAB1Q14722 419 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 SPSB1Q96BD6 273 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 TRIB1Q96RU8 372 aa13.1□□□□□ -0.31
SMARCA4-214ENST00000589677 FGF2P09038 288 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 DDTP30046 118 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 FUT6P51993 359 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 SHHQ15465 462 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 CST9Q5W186 159 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 RAB24Q969Q5 203 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 PRDM7Q9NQW5 492 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 AQP7P3A6NL99 342 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 CDC42EP2O14613 210 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 SH2D1BO14796 132 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 CFDP00746 253 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 ICAM2P13598 275 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 FUT3P21217 361 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 CLDN15P56746 228 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 OR5I1Q13606 314 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 MRPL58Q14197 206 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 FZD2Q14332 565 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 THSD4Q6ZMP0 1018 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 ZNF573Q86YE8 665 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 ADAT1Q9BUB4 502 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 VN1R1Q9GZP7 353 aa13.09□□□□□ -0.31
SMARCA4-214ENST00000589677 ZFP64Q9NPA5 681 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms