RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 LYNP07948 512 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 CST2P09228 141 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 GNAO1P09471 354 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 DBTP11182 482 aaKnown RBP4.98□□□□□ -1.61
VPS25-204ENST00000589577 HSD11B1P28845 292 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 APLNRP35414 380 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 NAA10P41227 235 aaPredicted RBP4.98□□□□□ -1.61
VPS25-204ENST00000589577 PITPNBP48739 271 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 ZNF133P52736 654 aaPredicted RBP4.98□□□□□ -1.61
VPS25-204ENST00000589577 ISL1P61371 349 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 SLC35A2P78381 396 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 ZNF91Q05481 1191 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 ECH1Q13011 328 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 EIF2B1Q14232 305 aaKnown RBP4.98□□□□□ -1.61
VPS25-204ENST00000589577 MOGQ16653 247 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 HIST3H3Q16695 136 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 C6orf141Q5SZD1 244 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 FAM27BQ5VT28 67 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 AADACL4Q5VUY2 407 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 MBNL2Q5VZF2 373 aaKnown RBP4.98□□□□□ -1.61
VPS25-204ENST00000589577 WDR25Q64LD2 544 aaPredicted RBP4.98□□□□□ -1.61
VPS25-204ENST00000589577 SLC25A47Q6Q0C1 308 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 CRIP3Q6Q6R5 217 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 LYPD2Q6UXB3 125 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 TMPRSS11AQ6ZMR5 421 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 Q6ZR03 302 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 PLEKHG7Q6ZR37 379 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 AHSA2Q719I0 299 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 SLC16A9Q7RTY1 509 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 SYT9Q86SS6 491 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 PDZD9Q8IXQ8 264 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 SLC35F2Q8IXU6 374 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 OR6V1Q8N148 313 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 LRRC18Q8N456 261 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 SLC22A24Q8N4F4 322 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 ACBD7Q8N6N7 88 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 OR10H4Q8NGA5 316 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 OR1J2Q8NGS2 313 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 KLF14Q8TD94 323 aaPredicted RBP4.98□□□□□ -1.61
VPS25-204ENST00000589577 THEM6Q8WUY1 208 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 LHX4Q969G2 390 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 SPTSSAQ969W0 71 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 NEIL1Q96FI4 390 aaPredicted RBP4.98□□□□□ -1.61
VPS25-204ENST00000589577 RCC1LQ96I51 464 aaKnown RBP4.98□□□□□ -1.61
VPS25-204ENST00000589577 TSSK2Q96PF2 358 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 TEAD3Q99594 435 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 ASCL2Q99929 193 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 SH3GL3Q99963 347 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 COPS4Q9BT78 406 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 MROQ9BYG7 248 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 NMNAT2Q9BZQ4 307 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 HDHD2Q9H0R4 259 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 NIPAL2Q9H841 368 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 CDH20Q9HBT6 801 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 POLE4Q9NR33 117 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 SERTAD4Q9NUC0 356 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 HAO2Q9NYQ3 351 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 IKZF2Q9UKS7 526 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 ZDHHC8Q9ULC8 765 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 ERGIC3Q9Y282 383 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 EXOSC1Q9Y3B2 195 aaKnown RBP4.98□□□□□ -1.61
VPS25-204ENST00000589577 LSM4Q9Y4Z0 139 aaKnown RBP4.98□□□□□ -1.61
VPS25-204ENST00000589577 TIMM10BQ9Y5J6 103 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 COMMD3-BMI1R4GMX3 469 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 OR6C6A6NF89 314 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 TVP23AA6NH52 213 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 ZNF878C9JN71 531 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 PTGES3LE9PB15 166 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 SLC1A7O00341 560 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 ZNF593O00488 134 aaPredicted RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 SGCEO43556 437 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 ENSAO43768 121 aaKnown RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 ANGPTL7O43827 346 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 DOK2O60496 412 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 MRPS14O60783 128 aaKnown RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 FCN3O75636 299 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 ZFPL1O95159 310 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 RPSAP08865 295 aaKnown RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 MRPL3P09001 348 aaKnown RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 H2BFMP0C1H6 154 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 OR2T7P0C7T2 308 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 CLUP10909 449 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 PIPP12273 146 aaPredicted RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 CPT2P23786 658 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 LMO1P25800 156 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 CDAP32320 146 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 HTR5AP47898 357 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 GDI2P50395 445 aaKnown RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 RIDAP52758 137 aaKnown RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 TAS2R43P59537 309 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 GABARAPL2P60520 117 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 GRB2P62993 217 aaKnown RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 MRPL28Q13084 256 aaKnown RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 HABP2Q14520 560 aaPredicted RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 TBC1D28Q2M2D7 210 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 ZNF829Q3KNS6 432 aaPredicted RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 ZNF404Q494X3 552 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 TCTEX1D4Q5JR98 221 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 TEX30Q5JUR7 227 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 FAM201AQ5SY85 155 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms