RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 NUDCD2Q8WVJ2 157 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 ROBO4Q8WZ75 1007 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 HAS2Q92819 552 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 DVL3Q92997 716 aaPredicted RBP8.69□□□□□ -1.02
VPS25-202ENST00000589219 TECTBQ96PL2 329 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 SIGLEC12Q96PQ1 595 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 SOX7Q9BT81 388 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 TM2D1Q9BX74 207 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 TTTY12Q9BZ98 90 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 TINAGL1Q9GZM7 467 aaPredicted RBP8.69□□□□□ -1.02
VPS25-202ENST00000589219 CLEC4MQ9H2X3 399 aaPredicted RBP8.69□□□□□ -1.02
VPS25-202ENST00000589219 POFUT1Q9H488 388 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 PARPBPQ9NWS1 579 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 ZNF224Q9NZL3 707 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 PIPOXQ9P0Z9 390 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 MYEF2Q9P2K5 600 aaKnown RBP8.69□□□□□ -1.02
VPS25-202ENST00000589219 PIGLQ9Y2B2 252 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 TIMM10BQ9Y5J6 103 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 HECTD1Q9ULT8 2610 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 EML6Q6ZMW3 1958 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 A0A0A6YYD4 124 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 WIPF3A6NGB9 483 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 ZNF724A8MTY0 619 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 MFNGO00587 321 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 AKR7A2O43488 359 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 XRCC2O43543 280 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 NME2P1O60361 137 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 CRTAPO75718 401 aaPredicted RBP8.68□□□□□ -1.02
VPS25-202ENST00000589219 OR4E1P0C645 316 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 B4GALT1P15291 398 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 FAHP16930 419 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 ZNF32P17041 273 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 NME2P22392 152 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 CPT2P23786 658 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 PTGFRP43088 359 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 RRADP55042 308 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 PER3P56645 1201 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 CLDN18P56856 261 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 TAS2R31P59538 309 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 TSPAN5P62079 268 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 IKZF1Q13422 519 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 IGFBP7Q16270 282 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 RSPO1Q2MKA7 263 aaPredicted RBP8.68□□□□□ -1.02
VPS25-202ENST00000589219 VAX1Q5SQQ9 334 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 ATPAF1Q5TC12 328 aaPredicted RBP8.68□□□□□ -1.02
VPS25-202ENST00000589219 ZBTB37Q5TC79 503 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 SPINK14Q6IE38 97 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 FAHD2BQ6P2I3 314 aaPredicted RBP8.68□□□□□ -1.02
VPS25-202ENST00000589219 LHFPL2Q6ZUX7 228 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 FTMTQ8N4E7 242 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 FAM89BQ8N5H3 189 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 ARRDC1Q8N5I2 433 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 MDS2Q8NDY4 140 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 CMBLQ96DG6 245 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 FAHD2AQ96GK7 314 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 REEP6Q96HR9 211 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 S100A13Q99584 98 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 SELENOIQ9C0D9 397 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 OR2H1Q9GZK4 316 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 CA10Q9NS85 328 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 EIF3KQ9UBQ5 218 aaKnown RBP8.68□□□□□ -1.02
VPS25-202ENST00000589219 ELF5Q9UKW6 265 aaPredicted RBP8.68□□□□□ -1.02
VPS25-202ENST00000589219 NOSIPQ9Y314 301 aaKnown RBP8.68□□□□□ -1.02
VPS25-202ENST00000589219 FLNCQ14315 2725 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 DOPEY2Q9Y3R5 2298 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 PTPN13Q12923 2485 aa8.68□□□□□ -1.02
VPS25-202ENST00000589219 NBASA2RRP1 2371 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 SERPINE3A8MV23 424 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 ZNF587BE7ETH6 402 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 E9PLN8 166 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 KLRC4-KLRK1H3BQV0 150 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 RPL36A-HNRNPH2H7BZ11 118 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 M0R233 179 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 GOSR2O14653 212 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 SSX5O60225 188 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 MRPL33O75394 65 aaKnown RBP8.67□□□□□ -1.02
VPS25-202ENST00000589219 ACTL6AO96019 429 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 IFNA7P01567 189 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 IFNA6P05013 189 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 SP1P08047 785 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 DBHP09172 617 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 COX5BP10606 129 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 CD46P15529 392 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 GNB3P16520 340 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 ANOS1P23352 680 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 HTR2BP41595 481 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 MEOX1P50221 254 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 ZNF81P51508 661 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 TAS2R46P59540 309 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 UBE2MP61081 183 aaKnown RBP8.67□□□□□ -1.02
VPS25-202ENST00000589219 RNPS1Q15287 305 aaKnown RBP8.67□□□□□ -1.02
VPS25-202ENST00000589219 SNAI3Q3KNW1 292 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 SCGB2B2Q4G0G5 96 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 ZNF774Q6NX45 483 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 C11orf88Q6PI97 169 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 SULF2Q8IWU5 870 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 MUC20Q8N307 709 aaPredicted RBP8.67□□□□□ -1.02
VPS25-202ENST00000589219 C12orf45Q8N5I9 185 aaPredicted RBP8.67□□□□□ -1.02
VPS25-202ENST00000589219 TMEM251Q8N6I4 163 aa8.67□□□□□ -1.02
VPS25-202ENST00000589219 UXS1Q8NBZ7 420 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms