RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 ANGPTL7O43827 346 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 FBXO24O75426 580 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 FABP3P05413 133 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 PSG2P11465 335 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 ERVFRD-1P60508 538 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 EIF2B1Q14232 305 aaKnown RBP11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 GFOD2Q3B7J2 385 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 FOXB2Q5VYV0 432 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 LIAT1Q6ZQX7 453 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 RASSF6Q6ZTQ3 369 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 TIGD4Q8IY51 512 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 OR52L1Q8NGH7 329 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 OR5D13Q8NGL4 314 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 OR5K1Q8NHB7 308 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 SDSLQ96GA7 329 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 MED30Q96HR3 178 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 CITED2Q99967 270 aaPredicted RBP11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 MICU1Q9BPX6 476 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 NPFFR1Q9GZQ6 430 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 RGCCQ9H4X1 137 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 SF3B6Q9Y3B4 125 aaKnown RBP11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 K7EIL1 84 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 ARPC2O15144 300 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 XPNPEP2O43895 674 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 GASTP01350 101 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 HSD17B1P14061 328 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 NDUFB7P17568 137 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 CFL1P23528 166 aaKnown RBP11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 GNALP38405 381 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 IFNGR2P38484 337 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 SLC15A1P46059 708 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 TAF13Q15543 124 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 NSUN5P1Q3KNT7 163 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 C11orf87Q6NUJ2 197 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 Q6ZS46 218 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 LHFPL4Q7Z7J7 247 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 NDUFA11Q86Y39 141 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 OR6K6Q8NGW6 343 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 CLPTM1LQ96KA5 538 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 FAM234AQ9H0X4 552 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 OR51I2Q9H344 312 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 RAB18Q9NP72 206 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 TBC1D23Q9NUY8 699 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 ARMC1Q9NVT9 282 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 VNN3Q9NY84 501 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 MAGEL2Q9UJ55 1249 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 TCF19Q9Y242 345 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 KLHDC2Q9Y2U9 406 aa11.14□□□□□ -0.63
CLPTM1-208ENST00000588274 A6NDX4 124 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 ANXA2P2A6NMY6 339 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 MTRF1O75570 445 aaKnown RBP11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 HSD11B1P28845 292 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 MSX2P35548 267 aaPredicted RBP11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 MAGEA2P43356 314 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 DLX6P56179 175 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 CD177Q8N6Q3 437 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 PAPD5Q8NDF8 572 aaKnown RBP11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 WFDC9Q8NEX5 89 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 OR6N2Q8NGY6 317 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 TSSK6Q9BXA6 273 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 CDCA4Q9BXL8 241 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 OR10A2Q9H208 303 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 MED20Q9H944 212 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 BRD7Q9NPI1 651 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 CMC2Q9NRP2 79 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 LRP12Q9Y561 859 aa11.13□□□□□ -0.63
CLPTM1-208ENST00000588274 FAM183AA6NL82 134 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 ODF3BA8MYP8 253 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 H0YAE9 185 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 CCDC22O60826 627 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 SOX14O95416 240 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 CCL3L1P16619 93 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 GLRA1P23415 457 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 GPM6AP51674 278 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 PSMA6P60900 246 aaKnown RBP11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 BLMHQ13867 455 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 ZNF273Q14593 569 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 TMEM95Q3KNT9 176 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 VAX1Q5SQQ9 334 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 ZBTB37Q5TC79 503 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 TMEM200BQ69YZ2 307 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 ERI1Q8IV48 349 aaKnown RBP11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 ZDHHC23Q8IYP9 409 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 FAM185AQ8N0U4 392 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 TMEM185AQ8NFB2 350 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 OR4S1Q8NGB4 309 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 OR8B12Q8NGG6 310 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 AQP3Q92482 292 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 SGCDQ92629 289 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 R3HDM4Q96D70 268 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 RNF170Q96K19 258 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 INTS14Q96SY0 518 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 ABCB9Q9NP78 766 aa11.12□□□□□ -0.63
CLPTM1-208ENST00000588274 IGLV3-1P01715 115 aa11.11□□□□□ -0.63
CLPTM1-208ENST00000588274 APOC1P02654 83 aa11.11□□□□□ -0.63
CLPTM1-208ENST00000588274 IGLL1P15814 213 aa11.11□□□□□ -0.63
CLPTM1-208ENST00000588274 RAB13P51153 203 aa11.11□□□□□ -0.63
CLPTM1-208ENST00000588274 PPP1R8Q12972 351 aaKnown RBP11.11□□□□□ -0.63
CLPTM1-208ENST00000588274 DMRTC1Q5HYR2 192 aa11.11□□□□□ -0.63
CLPTM1-208ENST00000588274 TCTEX1D4Q5JR98 221 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 227.7 ms