RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ZNF584Q8IVC4 421 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 CPEB3Q8NE35 698 aaKnown RBP8.06□□□□□ -1.12
SS18-220ENST00000582092 SLC30A7Q8NEW0 376 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 TRIM63Q969Q1 353 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 ITPKCQ96DU7 683 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 NKX3-1Q99801 234 aaPredicted RBP8.06□□□□□ -1.12
SS18-220ENST00000582092 SOX7Q9BT81 388 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 KCNK15Q9H427 330 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 AUNIPQ9H7T9 357 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 PLSCR2Q9NRY7 297 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 PTTG3PQ9NZH4 202 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 SPTAN1Q13813 2472 aaKnown RBP8.06□□□□□ -1.12
SS18-220ENST00000582092 TRAV6A0A075B6T7 132 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 WIPF3A6NGB9 483 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 H7C417 338 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 SSX4O60224 188 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 GMDSO60547 372 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 ZNF780AO75290 641 aaPredicted RBP8.05□□□□□ -1.12
SS18-220ENST00000582092 LYZL6O75951 148 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 HTR3BO95264 441 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 TCRBP04435 133 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 H2AFB2P0C5Z0 115 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 SERPINA2P20848 420 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 IL32P24001 234 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 SLC6A1P30531 599 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 OR3A4PP47883 348 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 EIF2B2P49770 351 aaKnown RBP8.05□□□□□ -1.12
SS18-220ENST00000582092 FOXG1P55316 489 aaPredicted RBP8.05□□□□□ -1.12
SS18-220ENST00000582092 TAS2R19P59542 299 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 FAM3AP98173 230 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 ZNF92Q03936 586 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 ARFRP1Q13795 201 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 KLF9Q13886 244 aaPredicted RBP8.05□□□□□ -1.12
SS18-220ENST00000582092 UBE2V2Q15819 145 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 KRTAP27-1Q3LI81 207 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 SFRP4Q6FHJ7 346 aaPredicted RBP8.05□□□□□ -1.12
SS18-220ENST00000582092 RTL6Q6ICC9 239 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 ASPHD2Q6ICH7 369 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 TFAP2EQ6VUC0 442 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 MDP1Q86V88 176 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 OR5AS1Q8N127 324 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 C9orf106Q8NAJ2 232 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 OR10R2Q8NGX6 335 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 RAB3CQ96E17 227 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 PAPOLGQ9BWT3 736 aaKnown RBP8.05□□□□□ -1.12
SS18-220ENST00000582092 HRASLSQ9HDD0 168 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 PLSCR4Q9NRQ2 329 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 NKIRAS2Q9NYR9 191 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 FBLN5Q9UBX5 448 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 KLK11Q9UBX7 282 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 MTFP1Q9UDX5 166 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 BSNQ9UPA5 3926 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 CACNA1DQ01668 2161 aa8.05□□□□□ -1.12
SS18-220ENST00000582092 LOC100509620A0A075B734 347 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 ANKRD20A5PA0PJZ0 165 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 A1L4Q6 167 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 C5orf63A6NC05 138 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 MEIS3P1A6NDR6 274 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 HMX3A6NHT5 357 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 ZNF850A8MQ14 1090 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 ZNF736B4DX44 427 aaPredicted RBP8.04□□□□□ -1.12
SS18-220ENST00000582092 DISC1C4P0D8 188 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 E9PLN8 166 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 LDLRAD4O15165 306 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 CDC14BO60729 498 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 IL18BPO95998 194 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 IFNA6P05013 189 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 GSTP1P09211 210 aaKnown RBP8.04□□□□□ -1.12
SS18-220ENST00000582092 VSIG8P0DPA2 414 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 CCL2P13500 99 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 SELEP16581 610 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 PSMB1P20618 241 aaKnown RBP8.04□□□□□ -1.12
SS18-220ENST00000582092 IGHV1-2P23083 117 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 HLA-DMAP28067 261 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 CBX5P45973 191 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 IDH3GP51553 393 aaPredicted RBP8.04□□□□□ -1.12
SS18-220ENST00000582092 PLA2G7Q13093 441 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 P2RY6Q15077 328 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 TATDN3Q17R31 274 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 TMEM211Q6ICI0 200 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 Q6ZSR3 168 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 Q6ZTK2 550 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 BTN2A1Q7KYR7 527 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 TRAPPC6BQ86SZ2 158 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 CDH24Q86UP0 819 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 CD163Q86VB7 1156 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 ZNF808Q8N4W9 903 aaPredicted RBP8.04□□□□□ -1.12
SS18-220ENST00000582092 C1orf162Q8NEQ5 155 aaPredicted RBP8.04□□□□□ -1.12
SS18-220ENST00000582092 OR5D18Q8NGL1 313 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 OR8S1Q8NH09 359 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 OR56B4Q8NH76 319 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 FAM57AQ8TBR7 257 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 GCDHQ92947 438 aaPredicted RBP8.04□□□□□ -1.12
SS18-220ENST00000582092 SPSB4Q96A44 273 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 POM121L2Q96KW2 1035 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 NUDT16L1Q9BRJ7 211 aaKnown RBP8.04□□□□□ -1.12
SS18-220ENST00000582092 MARVELD1Q9BSK0 173 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 SELENOIQ9C0D9 397 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 MED28Q9H204 178 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 BANF2Q9H503 90 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms