RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	COMMD2	Q86X83	199 aa		10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	EGFL6	Q8IUX8	553 aa		10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	SIGLECL1	Q8N7X8	197 aa		10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	OR51E1	Q8TCB6	317 aa		10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	HPSE2	Q8WWQ2	592 aa		10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	GCDH	Q92947	438 aa	Predicted RBP	10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	RAB3IP	Q96QF0	476 aa	Predicted RBP	10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	SEMA6A	Q9H2E6	1030 aa		10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	OR51I2	Q9H344	312 aa		10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	SMURF1	Q9HCE7	757 aa		10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ESM1	Q9NQ30	184 aa		10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	OR52A1	Q9UKL2	312 aa		10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	KPTN	Q9Y664	436 aa		10.44	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	NBEAL1	Q6ZS30	2694 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	TRAV40	A0A0B4J280	105 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	NKX6-3	A6NJ46	265 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	SNTN	A6NMZ2	147 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	PRR32	B1ATL7	298 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	PSMD9	O00233	223 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	EBAG9	O00559	213 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	NDUFB3	O43676	98 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	TOX4	O94842	621 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	IGHV4-38-2	P0DP08	117 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	MMP9	P14780	707 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ALDH3A2	P51648	485 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	GPM6A	P51674	278 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	LRRC10	Q5BKY1	277 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	WDR38	Q5JTN6	314 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	CLVS2	Q5SYC1	327 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ZNF684	Q5T5D7	378 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	MEDAG	Q5VYS4	303 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	PLEKHG7	Q6ZR37	379 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	BTN2A1	Q7KYR7	527 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	BCDIN3D	Q7Z5W3	292 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	KCTD20	Q7Z5Y7	419 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ZNF573	Q86YE8	665 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	KIR3DL3	Q8N743	410 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	LY6G5B	Q8NDX9	201 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	OR51G2	Q8NGK0	314 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	PYDC1	Q8WXC3	89 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	C22orf15	Q8WYQ4	148 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	SLC25A28	Q96A46	364 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	HRASLS5	Q96KN8	279 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	WDFY2	Q96P53	400 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	MYCBP	Q99417	103 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	APOL4	Q9BPW4	351 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	RIBC2	Q9H4K1	309 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	CNTD2	Q9H8S5	307 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	NOX4	Q9NPH5	578 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	IMPAD1	Q9NX62	359 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	DNAJB11	Q9UBS4	358 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	MRM2	Q9UI43	246 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	RPUSD1	Q9UJJ7	312 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	PIGL	Q9Y2B2	252 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708		V9GYS6	101 aa		10.43	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	METTL15	A6NJ78	407 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	SAC3D1	A6NKF1	404 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ZNF732	B4DXR9	585 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708		H3BNX3	289 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708		M0R129	80 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	NOS1AP	O75052	506 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	NRAS	P01111	189 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	RNASE1	P07998	156 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ACAA1	P09110	424 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	CCL1	P22362	96 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ATP6V1E1	P36543	226 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	POLR2I	P36954	125 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	CAV3	P56539	151 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	SNRPG	P62308	76 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ACTC1	P68032	377 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ACTA1	P68133	377 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	IL13RA1	P78552	427 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	MFGE8	Q08431	387 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	FOXL1	Q12952	345 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	BAMBI	Q13145	260 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	KPNB1	Q14974	876 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	CDON	Q4KMG0	1287 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ZNF788	Q6ZQV5	615 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	C1orf122	Q6ZSJ8	110 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	CMTM4	Q8IZR5	234 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ANGPTL6	Q8NI99	470 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	C8orf46	Q8TAG6	207 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	GATAD2B	Q8WXI9	593 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	RPL3L	Q92901	407 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	EME1	Q96AY2	570 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	C10orf35	Q96D05	121 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	FAM71F1	Q96KD3	344 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	CCL13	Q99616	98 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	PPP1R3E	Q9H7J1	279 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	NLK	Q9UBE8	527 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	PCDHGB1	Q9Y5G3	927 aa		10.42	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	IGHV3OR15-7	A0A075B7D8	119 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708		A0A1B0GTI1	187 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708		A0A1B0GVI7	797 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708		A0A1W2PQL4	384 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	DNAJC9-AS1	A6NH13	148 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	OR2AT4	A6NND4	320 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708		E9PQ18	207 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	HAX1	O00165	279 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms