RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 FAIM2Q9BWQ8 316 aa3.13□□□□□ -1.91
NF1-220ENST00000581113 ING2Q9H160 280 aa3.13□□□□□ -1.91
NF1-220ENST00000581113 METTL9Q9H1A3 318 aa3.13□□□□□ -1.91
NF1-220ENST00000581113 C1orf109Q9NX04 203 aa3.13□□□□□ -1.91
NF1-220ENST00000581113 TAS2R7Q9NYW3 318 aa3.13□□□□□ -1.91
NF1-220ENST00000581113 RAB23Q9ULC3 237 aa3.13□□□□□ -1.91
NF1-220ENST00000581113 RCL1Q9Y2P8 373 aaKnown RBP3.13□□□□□ -1.91
NF1-220ENST00000581113 KCNIP3Q9Y2W7 256 aa3.13□□□□□ -1.91
NF1-220ENST00000581113 CACNA1HO95180 2353 aa3.13□□□□□ -1.91
NF1-220ENST00000581113 WDFY4Q6ZS81 3184 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 IGLV8-61A0A075B6I0 122 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 A0A1W2PRF3 423 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 A0A1W2PRM7 423 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 TCRBV9S1A1TA0A576 114 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 PSMB11A5LHX3 300 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 FAM231BA6NCW3 169 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 F5H5T6 163 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 H0Y980 276 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 PPIHO43447 177 aaKnown RBP3.12□□□□□ -1.91
NF1-220ENST00000581113 FAM189A1O60320 539 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 LYPD3O95274 346 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 CXCL8P10145 99 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 ATF6P18850 670 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 TGFBR2P37173 567 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 RANBP1P43487 201 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 IDH2P48735 452 aaKnown RBP3.12□□□□□ -1.91
NF1-220ENST00000581113 SERPINB8P50452 374 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 ARPP19P56211 112 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 CLDN12P56749 244 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 CKAP4Q07065 602 aaKnown RBP3.12□□□□□ -1.91
NF1-220ENST00000581113 STX4Q12846 297 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 TAF1AQ15573 450 aaPredicted RBP3.12□□□□□ -1.91
NF1-220ENST00000581113 ATP6V1FQ16864 119 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 TIGITQ495A1 244 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 ZNF544Q6NX49 715 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 APTXQ7Z2E3 356 aaKnown RBP3.12□□□□□ -1.91
NF1-220ENST00000581113 KRTAP11-1Q8IUC1 163 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 WDFY1Q8IWB7 410 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 IQCKQ8N0W5 287 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 LRRC52Q8N7C0 313 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 OR51F2Q8NH61 342 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 SLC7A13Q8TCU3 470 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 GPR151Q8TDV0 419 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 CXorf40AQ8TE69 158 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 OR8D1Q8WZ84 308 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 OR5P2Q8WZ92 322 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 FGF14Q92915 247 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 SDSLQ96GA7 329 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 COPS4Q9BT78 406 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 PATZ1Q9HBE1 687 aaKnown RBP3.12□□□□□ -1.91
NF1-220ENST00000581113 HRASLSQ9HDD0 168 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 INIPQ9NRY2 104 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 PAK1IP1Q9NWT1 392 aaPredicted RBP3.12□□□□□ -1.91
NF1-220ENST00000581113 GID8Q9NWU2 228 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 SLC25A37Q9NYZ2 338 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 UBQLN1Q9UMX0 589 aaKnown RBP3.12□□□□□ -1.91
NF1-220ENST00000581113 SCML2Q9UQR0 700 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 EXOSC1Q9Y3B2 195 aaKnown RBP3.12□□□□□ -1.91
NF1-220ENST00000581113 FLVCR1Q9Y5Y0 555 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 KMT2EQ8IZD2 1858 aa3.12□□□□□ -1.91
NF1-220ENST00000581113 VPS37CA5D8V6 355 aaPredicted RBP3.11□□□□□ -1.91
NF1-220ENST00000581113 SMIM23A6NLE4 172 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 ZFP92A6NM28 416 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 FAM220BPB1ANY3 271 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 ANKRD63C9JTQ0 380 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 CCRL2O00421 344 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 DYNC1I1O14576 645 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 HSD17B6O14756 317 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 GATCO43716 136 aaKnown RBP3.11□□□□□ -1.91
NF1-220ENST00000581113 MPDU1O75352 247 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 OR7A10O76100 309 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 CLIC3O95833 236 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 JCHAINP01591 159 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 TCRBP04435 133 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 HBQ1P09105 142 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 CCDC166P0CW27 439 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 DRD3P35462 400 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 TNFSF9P41273 254 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 GSSP48637 474 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 RPS14P62263 151 aaKnown RBP3.11□□□□□ -1.91
NF1-220ENST00000581113 PAFAH1B2P68402 229 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 S100A12P80511 92 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 GTF2BQ00403 316 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 ST3GAL3Q11203 375 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 TWF1Q12792 350 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 SLC9A3R2Q15599 337 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 TAL2Q16559 108 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 PIGGQ5H8A4 983 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 FAM78AQ5JUQ0 283 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 ACTL10Q5JWF8 245 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 TIMM23BQ5SRD1 257 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 HACD4Q5VWC8 232 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 ZNF57Q68EA5 555 aaPredicted RBP3.11□□□□□ -1.91
NF1-220ENST00000581113 PGAP1Q75T13 922 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 Q8N402 240 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 DHRSXQ8N5I4 330 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 TMEM251Q8N6I4 163 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 OR2T33Q8NG76 320 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 ZNF564Q8TBZ8 553 aaPredicted RBP3.11□□□□□ -1.91
NF1-220ENST00000581113 DYNC2LI1Q8TCX1 351 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms