RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 UBE2V2Q15819 145 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 FAM76BQ5HYJ3 339 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 TMEM255AQ5JRV8 349 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 TMEM91Q6ZNR0 172 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 NKAIN3Q8N8D7 197 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 PNLDC1Q8NA58 520 aaKnown RBP12.14□□□□□ -0.47
SKA2-205ENST00000580541 OR10AD1Q8NGE0 317 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 OR13C9Q8NGT0 318 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 OR11L1Q8NGX0 322 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 ZNF671Q8TAW3 534 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 UBASH3BQ8TF42 649 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 HPS1Q92902 700 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 OR2V2Q96R30 315 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 CHCHD6Q9BRQ6 235 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 FUNDC2Q9BWH2 189 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 FN3KRPQ9HA64 309 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 MYOZ1Q9NP98 299 aaPredicted RBP12.14□□□□□ -0.47
SKA2-205ENST00000580541 DLL4Q9NR61 685 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 UTP20O75691 2785 aaKnown RBP12.13□□□□□ -0.47
SKA2-205ENST00000580541 LOC100506127A0A0U1RQW1 187 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 FAM230AA0A1W2PPH8 454 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 LRP5LA4QPB2 252 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 LRRC30A6NM36 301 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 F5H5P2 479 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 H0YL77 283 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 MLNRO43193 412 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 GRPP07492 148 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 PRF1P14222 555 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 PAX1P15863 534 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 IGFBP3P17936 291 aaPredicted RBP12.13□□□□□ -0.47
SKA2-205ENST00000580541 GADD45AP24522 165 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 AZGP1P25311 298 aaKnown RBP12.13□□□□□ -0.47
SKA2-205ENST00000580541 CALRP27797 417 aaKnown RBP12.13□□□□□ -0.47
SKA2-205ENST00000580541 MAGEB1P43366 347 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 GATA4P43694 442 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 GPM6AP51674 278 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 GLT8D1Q68CQ7 371 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 ZNF529Q6P280 563 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 TPRA1Q86W33 373 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 ANKRD13BQ86YJ7 626 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 MEGF10Q96KG7 1140 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 GPER1Q99527 375 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 BCL7BQ9BQE9 202 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 OR51E2Q9H255 320 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 TPK1Q9H3S4 243 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 PCDHB16Q9NRJ7 776 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 ZNF701Q9NV72 531 aaPredicted RBP12.13□□□□□ -0.47
SKA2-205ENST00000580541 TXNL4BQ9NX01 149 aaKnown RBP12.13□□□□□ -0.47
SKA2-205ENST00000580541 TAS2R4Q9NYW5 299 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 NDUFA13Q9P0J0 144 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 PPP1R3CQ9UQK1 317 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 POLDIP2Q9Y2S7 368 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 SPG11Q96JI7 2443 aa12.13□□□□□ -0.47
SKA2-205ENST00000580541 TRIM64BA6NI03 449 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 A6NLC8 198 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 CDKN1AP38936 164 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 HFEQ30201 348 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 GPR107Q5VW38 600 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 C22orf42Q6IC83 251 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 SATL1Q86VE3 508 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 MKXQ8IYA7 352 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 C1orf87Q8N0U7 546 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 ZCCHC24Q8N2G6 241 aaKnown RBP12.12□□□□□ -0.47
SKA2-205ENST00000580541 ITLN1Q8WWA0 313 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 IGFBPL1Q8WX77 278 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 RDH5Q92781 318 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 TMIGD2Q96BF3 282 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 MBD6Q96DN6 1003 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 LURAP1Q96LR2 239 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 S100A13Q99584 98 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 GSX2Q9BZM3 304 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 PLEKHA6Q9Y2H5 1048 aa12.12□□□□□ -0.47
SKA2-205ENST00000580541 USF3Q68DE3 2245 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 CRYBG3Q68DQ2 2970 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 ARID1AO14497 2285 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 IGHV1-69-2A0A0G2JMI3 117 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 PQLC2LA1A4F0 135 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 PIN1P1O15428 100 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 PTBP3O95758 552 aaKnown RBP12.11□□□□□ -0.47
SKA2-205ENST00000580541 MAS1P04201 325 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 CSF3P09919 207 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 ZNF93P35789 620 aaPredicted RBP12.11□□□□□ -0.47
SKA2-205ENST00000580541 HAAOP46952 286 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 MTNR1BP49286 362 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 TMBIM6P55061 237 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 ATP5J2P56134 94 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 KRTAP10-9P60411 292 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 MAB21L1Q13394 359 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 BLMHQ13867 455 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 INSL4Q14641 139 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 KISS1Q15726 138 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 DDI2Q5TDH0 399 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 PEG10Q86TG7 708 aaKnown RBP12.11□□□□□ -0.47
SKA2-205ENST00000580541 LRRC75A-AS1Q8N1F1 130 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 TRMT10AQ8TBZ6 339 aaKnown RBP12.11□□□□□ -0.47
SKA2-205ENST00000580541 NPRL2Q8WTW4 380 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 RAB2BQ8WUD1 216 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 HPSE2Q8WWQ2 592 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 GTF3AQ92664 365 aaKnown RBP12.11□□□□□ -0.47
SKA2-205ENST00000580541 SORCS2Q96PQ0 1159 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms