RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 LHFPL3Q86UP9 236 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 PIP4P2Q8N4L2 257 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 SCCPDHQ8NBX0 429 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 OR5A2Q8NGI9 324 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 RHOXF1Q8NHV9 184 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 RAB40AQ8WXH6 277 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 RORBQ92753 470 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 ITPKCQ96DU7 683 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 CCL13Q99616 98 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 NUDT16L1Q9BRJ7 211 aaKnown RBP5.48□□□□□ -1.53
TRAF4-213ENST00000578917 VCXQ9H320 206 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 G6PC2Q9NQR9 355 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 SNTG1Q9NSN8 517 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 CHCHD3Q9NX63 227 aaKnown RBP5.48□□□□□ -1.53
TRAF4-213ENST00000578917 RPL36Q9Y3U8 105 aaKnown RBP5.48□□□□□ -1.53
TRAF4-213ENST00000578917 KIR2DS1A0A191URI9 304 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 ERICH4A6NGS2 130 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 NKX6-3A6NJ46 265 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 H0YHG0 523 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 DLGAP1O14490 977 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 DVL1O14640 695 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 SLC16A6O15403 523 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 NDUFB3O43676 98 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 ENSAO43768 121 aaKnown RBP5.47□□□□□ -1.53
TRAF4-213ENST00000578917 INMTO95050 263 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 PTBP3O95758 552 aaKnown RBP5.47□□□□□ -1.53
TRAF4-213ENST00000578917 AVPP01185 164 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 LHBP01229 141 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 LIPFP07098 398 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 HTR1AP08908 422 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 UBCP0CG48 685 aaKnown RBP5.47□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF12P17014 697 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF20P17024 532 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 EPHA1P21709 976 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 GLRA1P23415 457 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 HAAOP46952 286 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 GABRA2P47869 451 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 CAPZA1P52907 286 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 OR12D2P58182 307 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 HOXA4Q00056 320 aaPredicted RBP5.47□□□□□ -1.53
TRAF4-213ENST00000578917 SRSF2Q01130 221 aaKnown RBP5.47□□□□□ -1.53
TRAF4-213ENST00000578917 IKZF1Q13422 519 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 LRRC10Q5BKY1 277 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 ZBTB37Q5TC79 503 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 TMEM244Q5VVB8 128 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 TTC23Q5W5X9 447 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 WDR25Q64LD2 544 aaPredicted RBP5.47□□□□□ -1.53
TRAF4-213ENST00000578917 C1QL2Q7Z5L3 287 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 CATSPERDQ86XM0 798 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 FAM90A1Q86YD7 464 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF573Q86YE8 665 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 C11orf53Q8IXP5 236 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 ENTHD1Q8IYW4 607 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 RDH10Q8IZV5 341 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 DHRSXQ8N5I4 330 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 GCSAMQ8N6F7 178 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF676Q8N7Q3 588 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 PNLDC1Q8NA58 520 aaKnown RBP5.47□□□□□ -1.53
TRAF4-213ENST00000578917 SETD9Q8NE22 299 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 CCDC54Q8NEL0 328 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 NPRL2Q8WTW4 380 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 C22orf15Q8WYQ4 148 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 ST8SIA4Q92187 359 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 H1FXQ92522 213 aaKnown RBP5.47□□□□□ -1.53
TRAF4-213ENST00000578917 TMIGD2Q96BF3 282 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 LGALS12Q96DT0 336 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 MED30Q96HR3 178 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 RDH12Q96NR8 316 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 JMJD8Q96S16 334 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 MDFIQ99750 246 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 PCGF1Q9BSM1 259 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 SUCNR1Q9BXA5 334 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 TMPRSS13Q9BYE2 586 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 MS4A7Q9GZW8 240 aaPredicted RBP5.47□□□□□ -1.53
TRAF4-213ENST00000578917 C8orf4Q9NR00 106 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 GPR173Q9NS66 373 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 ACOXLQ9NUZ1 547 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 INSIG2Q9Y5U4 225 aa5.47□□□□□ -1.53
TRAF4-213ENST00000578917 MALRD1Q5VYJ5 2156 aa5.46□□□□□ -1.53
TRAF4-213ENST00000578917 IGHV3OR16-10A0A075B7F0 116 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 A0A0A6YYJ9 748 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 IGHV2-70DA0A0C4DH43 119 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 A0A1B0GTI1 187 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 IRGMA1A4Y4 181 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 ANKRD61A6NGH8 418 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 OR2AT4A6NND4 320 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 A8MXK9 166 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 F5H0A9 414 aaPredicted RBP5.46□□□□□ -1.54
TRAF4-213ENST00000578917 HAX1O00165 279 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 SRSF10O75494 262 aaKnown RBP5.46□□□□□ -1.54
TRAF4-213ENST00000578917 GATBO75879 557 aaKnown RBP5.46□□□□□ -1.54
TRAF4-213ENST00000578917 NXPH2O95156 264 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 ECDO95905 644 aaPredicted RBP5.46□□□□□ -1.54
TRAF4-213ENST00000578917 CYB5AP00167 134 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 PLATP00750 562 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 RPSAP08865 295 aaKnown RBP5.46□□□□□ -1.54
TRAF4-213ENST00000578917 DBTP11182 482 aaKnown RBP5.46□□□□□ -1.54
TRAF4-213ENST00000578917 NDUFB7P17568 137 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 MYL12AP19105 171 aa5.46□□□□□ -1.54
TRAF4-213ENST00000578917 CFHR2P36980 270 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms