RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 PTTG1O95997 202 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 PAHP00439 452 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 EIF4EP06730 217 aaKnown RBP8.76□□□□□ -1.01
SS18-210ENST00000578700 MMP7P09237 267 aaPredicted RBP8.76□□□□□ -1.01
SS18-210ENST00000578700 IL7P13232 177 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 HOXB1P14653 301 aaPredicted RBP8.76□□□□□ -1.01
SS18-210ENST00000578700 ARSBP15848 533 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 IGFBP3P17936 291 aaPredicted RBP8.76□□□□□ -1.01
SS18-210ENST00000578700 ADRA2CP18825 462 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 CFPP27918 469 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 APLNRP35414 380 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 THBS4P35443 961 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 DDOSTP39656 456 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 RAB1AP62820 205 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 SRSF2Q01130 221 aaKnown RBP8.76□□□□□ -1.01
SS18-210ENST00000578700 SPOCK1Q08629 439 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 RIN1Q13671 783 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 FAM189A2Q15884 450 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 GSG1Q2KHT4 349 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 STEAP3Q658P3 488 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 LYSMD2Q8IV50 215 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 CDH26Q8IXH8 852 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 PNLDC1Q8NA58 520 aaKnown RBP8.76□□□□□ -1.01
SS18-210ENST00000578700 DNAAF1Q8NEP3 725 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 SEMA6DQ8NFY4 1073 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 OR4M1Q8NGD0 313 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 OR1K1Q8NGR3 316 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 OR1J2Q8NGS2 313 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 OR13C9Q8NGT0 318 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 LILRB1Q8NHL6 650 aaPredicted RBP8.76□□□□□ -1.01
SS18-210ENST00000578700 ITFG2Q969R8 447 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 FBXW5Q969U6 566 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 UQCC2Q9BRT2 126 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 DIABLOQ9NR28 239 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 C14orf119Q9NWQ9 140 aa8.76□□□□□ -1.01
SS18-210ENST00000578700 CADP27708 2225 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 LOC100289279A0A1B0GTE1 492 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 OVOL3O00110 214 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 SSX4O60224 188 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 TPPPO94811 219 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 F12P00748 615 aaPredicted RBP8.75□□□□□ -1.01
SS18-210ENST00000578700 HLA-HP01893 362 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 SERPINA5P05154 406 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 CD3EP07766 207 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 HCKP08631 526 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 DBHP09172 617 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 PATE4P0C8F1 98 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 CCNOP22674 350 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 MAP2K3P46734 347 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 MRPS10P82664 201 aaKnown RBP8.75□□□□□ -1.01
SS18-210ENST00000578700 RIPPLY1Q0D2K3 151 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 P2RY14Q15391 338 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 CNN3Q15417 329 aaKnown RBP8.75□□□□□ -1.01
SS18-210ENST00000578700 KRTAP24-1Q3LI83 254 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 TMEM69Q5SWH9 247 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 GLYATL3Q5SZD4 288 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 HACD4Q5VWC8 232 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 MZT2BQ6NZ67 158 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 TFAP2EQ6VUC0 442 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 Q6ZT83 130 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 BEND4Q6ZU67 534 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 CENPSQ8N2Z9 138 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 FTMTQ8N4E7 242 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 PLPP7Q8NBV4 271 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 SYNPRQ8TBG9 265 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 SLC7A6Q92536 515 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 FAM3DQ96BQ1 224 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 S100PBPQ96BU1 408 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 REEP6Q96HR9 211 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 GPER1Q99527 375 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 S100A13Q99584 98 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 GFI1Q99684 422 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 TMEM204Q9BSN7 226 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 BEX2Q9BXY8 128 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 ABCG5Q9H222 651 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 OPA3Q9H6K4 179 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 METTL17Q9H7H0 456 aaPredicted RBP8.75□□□□□ -1.01
SS18-210ENST00000578700 PPP1R3EQ9H7J1 279 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 RHBDL2Q9NX52 303 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 OR5V1Q9UGF6 321 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 PIGLQ9Y2B2 252 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 MRPS7Q9Y2R9 242 aaKnown RBP8.75□□□□□ -1.01
SS18-210ENST00000578700 RNF115Q9Y4L5 304 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 V9GYS6 101 aa8.75□□□□□ -1.01
SS18-210ENST00000578700 A0A0G2JMP0 313 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 A0A0X1KG70 313 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 C5orf49A4QMS7 147 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 METTL21EPA6NDL7 271 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 CENPXA8MT69 81 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 SCGNO76038 276 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 IGHV4-39P01824 125 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 FAM157CP0CG43 387 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 UBBP0CG47 229 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 STOMP27105 288 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 ZNF93P35789 620 aaPredicted RBP8.74□□□□□ -1.01
SS18-210ENST00000578700 CLDN12P56749 244 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 P2RY6Q15077 328 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 GUSBP1Q15486 140 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 ZNF79Q15937 498 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 TBC1D28Q2M2D7 210 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms