RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 SETD9Q8NE22 299 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 C4orf36Q96KX1 117 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 MYCBPQ99417 103 aaPredicted RBP16.29■□□□□ 0.2
SS18-209ENST00000578595 ALG8Q9BVK2 526 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 RPL36Q9Y3U8 105 aaKnown RBP16.29■□□□□ 0.2
SS18-209ENST00000578595 OR5B21A6NL26 309 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 OR12D2P58182 307 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 MICBQ29980 383 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 CDONQ4KMG0 1287 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 CLVS2Q5SYC1 327 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 C11orf53Q8IXP5 236 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 CNIH3Q8TBE1 160 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 APH1BQ8WW43 257 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 MRI1Q9BV20 369 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 TMPRSS13Q9BYE2 586 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 OCEL1Q9H607 264 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 MMP26Q9NRE1 261 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 ERVK-18Q9QC07 812 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 METRNQ9UJH8 293 aa16.28■□□□□ 0.2
SS18-209ENST00000578595 EXOGQ9Y2C4 368 aaKnown RBP16.28■□□□□ 0.2
SS18-209ENST00000578595 A0A1B0GTI1 187 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 LOC107986453A0A1B0GWG9 222 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 A8MXK9 166 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 DLGAP1O14490 977 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 AKR7A2O43488 359 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 UBCP0CG48 685 aaKnown RBP16.27■□□□□ 0.2
SS18-209ENST00000578595 ELF3P78545 371 aaPredicted RBP16.27■□□□□ 0.2
SS18-209ENST00000578595 SMN1Q16637 294 aaKnown RBP16.27■□□□□ 0.2
SS18-209ENST00000578595 KLHL22Q53GT1 634 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 ZNF691Q5VV52 312 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 HAGHLQ6PII5 290 aaPredicted RBP16.27■□□□□ 0.2
SS18-209ENST00000578595 BTNL3Q6UXE8 466 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 KCTD20Q7Z5Y7 419 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 FAM90A1Q86YD7 464 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 PRSS35Q8N3Z0 413 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 OR14K1Q8NGZ2 314 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 TRMT10AQ8TBZ6 339 aaKnown RBP16.27■□□□□ 0.2
SS18-209ENST00000578595 NPRL2Q8WTW4 380 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 ITFG2Q969R8 447 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 FGF23Q9GZV9 251 aaPredicted RBP16.27■□□□□ 0.2
SS18-209ENST00000578595 DCLRE1BQ9H816 532 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 SNTG1Q9NSN8 517 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 MYRFQ9Y2G1 1151 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 V9GYS6 101 aa16.27■□□□□ 0.2
SS18-209ENST00000578595 MXRA5Q9NR99 2828 aa16.27■□□□□ 0.19
SS18-209ENST00000578595 TRAPPC2LH3BP13 241 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 TMPRSS2O15393 492 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 FSTL3O95633 263 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 CPT2P23786 658 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 KIR3DL2P43630 455 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 RAB40BQ12829 278 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 SCGB2A2Q13296 93 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 ARMCX4Q5H9R4 360 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 OGFRL1Q5TC84 451 aaPredicted RBP16.26■□□□□ 0.19
SS18-209ENST00000578595 WDR25Q64LD2 544 aaPredicted RBP16.26■□□□□ 0.19
SS18-209ENST00000578595 OR5A2Q8NGI9 324 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 OR2G2Q8NGZ5 317 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 SEH1LQ96EE3 360 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 TLNRD1Q9H1K6 362 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 CTSZQ9UBR2 303 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 AUP1Q9Y679 476 aa16.26■□□□□ 0.19
SS18-209ENST00000578595 ANKRD61A6NGH8 418 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 NKX6-3A6NJ46 265 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 H0YHG0 523 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 J3QRE1 110 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 NDUFA2O43678 99 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 RGS9O75916 674 aaPredicted RBP16.25■□□□□ 0.19
SS18-209ENST00000578595 AVPP01185 164 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 ZNF20P17024 532 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 GLRA1P23415 457 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 GALEQ14376 348 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 RDH10Q8IZV5 341 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 ZNF676Q8N7Q3 588 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 OR5T2Q8NGG2 359 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 OR52I1Q8NGK6 324 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 OR10Z1Q8NGY1 313 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 NANPQ8TBE9 248 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 ST8SIA4Q92187 359 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 CCL13Q99616 98 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 RASSF4Q9H2L5 321 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 INPP5EQ9NRR6 644 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 SLC7A11Q9UPY5 501 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 INSIG2Q9Y5U4 225 aa16.25■□□□□ 0.19
SS18-209ENST00000578595 PPIAL4CA0A0B4J2A2 164 aa16.24■□□□□ 0.19
SS18-209ENST00000578595 FAM230AA0A1W2PPH8 454 aa16.24■□□□□ 0.19
SS18-209ENST00000578595 SRRM5B3KS81 715 aa16.24■□□□□ 0.19
SS18-209ENST00000578595 CASQ2O14958 399 aaPredicted RBP16.24■□□□□ 0.19
SS18-209ENST00000578595 WBP4O75554 376 aaKnown RBP16.24■□□□□ 0.19
SS18-209ENST00000578595 RHBDL1O75783 438 aa16.24■□□□□ 0.19
SS18-209ENST00000578595 LHBP01229 141 aa16.24■□□□□ 0.19
SS18-209ENST00000578595 OCM2P0CE71 109 aa16.24■□□□□ 0.19
SS18-209ENST00000578595 OCMP0CE72 109 aaPredicted RBP16.24■□□□□ 0.19
SS18-209ENST00000578595 MUC1P15941 1255 aaPredicted RBP16.24■□□□□ 0.19
SS18-209ENST00000578595 ZNF12P17014 697 aa16.24■□□□□ 0.19
SS18-209ENST00000578595 CCL1P22362 96 aa16.24■□□□□ 0.19
SS18-209ENST00000578595 CAPGP40121 348 aa16.24■□□□□ 0.19
SS18-209ENST00000578595 HAAOP46952 286 aa16.24■□□□□ 0.19
SS18-209ENST00000578595 NPY4RP50391 375 aa16.24■□□□□ 0.19
SS18-209ENST00000578595 ISL1P61371 349 aa16.24■□□□□ 0.19
SS18-209ENST00000578595 TMEM244Q5VVB8 128 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms