RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 OCMP0CE72 109 aaPredicted RBP14.46□□□□□ -0.09
NUP88-210ENST00000574867 ATF1P18846 271 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 PRKACBP22694 351 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 CRYBB2P43320 205 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 GPM6AP51674 278 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 PPP3R1P63098 170 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 DNAAF1Q8NEP3 725 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 OR13C9Q8NGT0 318 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 FOXC2Q99958 501 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 DLL4Q9NR61 685 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 PPP1R3CQ9UQK1 317 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 RAB3AP20336 220 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 GALP22466 123 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 THBS2P35442 1172 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 FAM76BQ5HYJ3 339 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 ZNF529Q6P280 563 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 CD200R1LQ6Q8B3 271 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 UNQ9370/PRO34162Q6UXP9 181 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 OR1M1Q8NGA1 313 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 FGF23Q9GZV9 251 aaPredicted RBP14.46□□□□□ -0.09
NUP88-210ENST00000574867 FN3KRPQ9HA64 309 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 GCM1Q9NP62 436 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 TAS2R4Q9NYW5 299 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 PQLC2LA1A4F0 135 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 LRP5LA4QPB2 252 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 ZNF732B4DXR9 585 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 LY6HO94772 140 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 AZGP1P25311 298 aaKnown RBP14.45□□□□□ -0.1
NUP88-210ENST00000574867 FUT6P51993 359 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 ZNF154Q13106 437 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 HFEQ30201 348 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 SPRNQ5BIV9 151 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 PRAMEF6Q5VXH4 476 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 CEACAM19Q7Z692 300 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 WDR86Q86TI4 376 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 Q8TCH9 128 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 HPS1Q92902 700 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 BORCS8Q96FH0 119 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 CPNE2Q96FN4 548 aaPredicted RBP14.45□□□□□ -0.1
NUP88-210ENST00000574867 TLNRD1Q9H1K6 362 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 FOXJ3Q9UPW0 622 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 ARID1AO14497 2285 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 IGKV1-9A0A0C4DH69 117 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 GABRPO00591 440 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 SSX4O60224 188 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 GPX5O75715 221 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 FABP5Q01469 135 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 ZNF181Q2M3W8 571 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 NPRL2Q8WTW4 380 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 NOX4Q9NPH5 578 aa14.45□□□□□ -0.1
NUP88-210ENST00000574867 CSMD2Q7Z408 3487 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 PDZD2O15018 2839 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 A6NLC8 198 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 ARL6IP5O75915 188 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 GRPP07492 148 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 UCHL1P09936 223 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 IGFBP3P17936 291 aaPredicted RBP14.44□□□□□ -0.1
NUP88-210ENST00000574867 TGFBR2P37173 567 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 RBP2P50120 134 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 DSCR9P59020 149 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 INSL4Q14641 139 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 DMRTC1Q5HYR2 192 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 ASPHD2Q6ICH7 369 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 PRSS57Q6UWY2 283 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 TMEM91Q6ZNR0 172 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 LHFPL2Q6ZUX7 228 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 MOGAT3Q86VF5 341 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 ZNF573Q86YE8 665 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 OR11L1Q8NGX0 322 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 TRMT10AQ8TBZ6 339 aaKnown RBP14.44□□□□□ -0.1
NUP88-210ENST00000574867 CHODLQ9H9P2 273 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 STUB1Q9UNE7 303 aa14.44□□□□□ -0.1
NUP88-210ENST00000574867 IGHV3-64DA0A0J9YX35 117 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 TRDV1A0A1B0GX56 115 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 LRRC30A6NM36 301 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 MAGEB3O15480 346 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 RP2O75695 350 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 CD36P16671 472 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 PDLIM4P50479 330 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 MPPED2Q15777 294 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 HSD17B12Q53GQ0 312 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 CLEC2AQ6UVW9 174 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 ZNF525Q8N782 197 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 YIPF5Q969M3 257 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 OR51I2Q9H344 312 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 TMEM138Q9NPI0 162 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 UFSP2Q9NUQ7 469 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 FAM230AA0A1W2PPH8 454 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 A0A1W2PPK0 400 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 NDUFS8O00217 210 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 PIN1P1O15428 100 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 CDC14BO60729 498 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 HCKP08631 526 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 ATP1B3P54709 279 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 TIMM50Q3ZCQ8 353 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 Q5PR19 223 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 CCL17Q92583 94 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 TMEM106BQ9NUM4 274 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 SCOCQ9UIL1 159 aa14.43□□□□□ -0.1
NUP88-210ENST00000574867 TRAV8-7A0A075B6U6 113 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms