RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 TMEM165Q9HC07 324 aa14.5□□□□□ -0.09
CLDN7-207ENST00000574070 FRRS1LQ9P0K9 344 aa14.5□□□□□ -0.09
CLDN7-207ENST00000574070 EXOSC1Q9Y3B2 195 aaKnown RBP14.5□□□□□ -0.09
CLDN7-207ENST00000574070 YLPM1P49750 1951 aaKnown RBP14.5□□□□□ -0.09
CLDN7-207ENST00000574070 ABCA1O95477 2261 aa14.49□□□□□ -0.09
CLDN7-207ENST00000574070 EFCAB10A6NFE3 127 aa14.49□□□□□ -0.09
CLDN7-207ENST00000574070 C3orf80F5H4A9 247 aa14.49□□□□□ -0.09
CLDN7-207ENST00000574070 XPNPEP2O43895 674 aa14.49□□□□□ -0.09
CLDN7-207ENST00000574070 MSMBP08118 114 aa14.49□□□□□ -0.09
CLDN7-207ENST00000574070 LIMS3P0CW19 117 aa14.49□□□□□ -0.09
CLDN7-207ENST00000574070 LIMS4P0CW20 117 aa14.49□□□□□ -0.09
CLDN7-207ENST00000574070 RPS2P15880 293 aaKnown RBP14.49□□□□□ -0.09
CLDN7-207ENST00000574070 NANOS3P60323 173 aaKnown RBP14.49□□□□□ -0.09
CLDN7-207ENST00000574070 GNG3P63215 75 aa14.49□□□□□ -0.09
CLDN7-207ENST00000574070 CEACAM21Q3KPI0 293 aa14.49□□□□□ -0.09
CLDN7-207ENST00000574070 STX19Q8N4C7 294 aa14.49□□□□□ -0.09
CLDN7-207ENST00000574070 C1orf159Q96HA4 380 aa14.49□□□□□ -0.09
CLDN7-207ENST00000574070 PATZ1Q9HBE1 687 aaKnown RBP14.49□□□□□ -0.09
CLDN7-207ENST00000574070 DIMT1Q9UNQ2 313 aaKnown RBP14.49□□□□□ -0.09
CLDN7-207ENST00000574070 DHRS7CA6NNS2 312 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 CEACAM18A8MTB9 384 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 SERPINA3P01011 423 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 CCDC159P0C7I6 412 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 ETV1P50549 477 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 CCR9P51686 369 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 GMFBP60983 142 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 HOXA4Q00056 320 aaPredicted RBP14.48□□□□□ -0.09
CLDN7-207ENST00000574070 ST3GAL4Q11206 333 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 KCNJ8Q15842 424 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 ZNF404Q494X3 552 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 FDX2Q6P4F2 183 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 AHSA2Q719I0 299 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 EGFL6Q8IUX8 553 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 C11orf53Q8IXP5 236 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 OR5A2Q8NGI9 324 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 TMEM186Q96B77 213 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 TMEM246Q9BRR3 403 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 ZNF649Q9BS31 505 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 JAM3Q9BX67 310 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 COMMD4Q9H0A8 199 aa14.48□□□□□ -0.09
CLDN7-207ENST00000574070 CAB39Q9Y376 341 aaPredicted RBP14.48□□□□□ -0.09
CLDN7-207ENST00000574070 TRAV38-1A0A0B4J264 116 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 ANKRD61A6NGH8 418 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 OOEPA6NGQ2 149 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 OR5B21A6NL26 309 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 LGALS8O00214 317 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 FOXH1O75593 365 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 GATBO75879 557 aaKnown RBP14.47□□□□□ -0.09
CLDN7-207ENST00000574070 ZNF20P17024 532 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 EGR1P18146 543 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 PCMT1P22061 227 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 HSPA13P48723 471 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 DVL1P1P54792 670 aaPredicted RBP14.47□□□□□ -0.09
CLDN7-207ENST00000574070 OR2G6Q5TZ20 316 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 WDR82Q6UXN9 313 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 GCSAMQ8N6F7 178 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 SCCPDHQ8NBX0 429 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 TRMT10AQ8TBZ6 339 aaKnown RBP14.47□□□□□ -0.09
CLDN7-207ENST00000574070 HAVCR2Q8TDQ0 301 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 FBLIM1Q8WUP2 373 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 RNF166Q96A37 237 aaPredicted RBP14.47□□□□□ -0.09
CLDN7-207ENST00000574070 FGF23Q9GZV9 251 aaPredicted RBP14.47□□□□□ -0.09
CLDN7-207ENST00000574070 SHARPINQ9H0F6 387 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 TRIM36Q9NQ86 728 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 HIF1ANQ9NWT6 349 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 SCN3BQ9NY72 215 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 CNOT2Q9NZN8 540 aaKnown RBP14.47□□□□□ -0.09
CLDN7-207ENST00000574070 ERVK-18Q9QC07 812 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 MIOXQ9UGB7 285 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 HHLA2Q9UM44 414 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 SLC7A11Q9UPY5 501 aa14.47□□□□□ -0.09
CLDN7-207ENST00000574070 RRP15Q9Y3B9 282 aaKnown RBP14.47□□□□□ -0.09
CLDN7-207ENST00000574070 IGHV3OR15-7A0A075B7D8 119 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 TRAV20A0A0B4J274 112 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 TRBV2A0A0J9YWF9 115 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 E9PI62 339 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 PLPP2O43688 288 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 OCM2P0CE71 109 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 OCMP0CE72 109 aaPredicted RBP14.46□□□□□ -0.09
CLDN7-207ENST00000574070 PIPP12273 146 aaPredicted RBP14.46□□□□□ -0.09
CLDN7-207ENST00000574070 VHLP40337 213 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 GTF2A1P52655 376 aaPredicted RBP14.46□□□□□ -0.09
CLDN7-207ENST00000574070 LCN2P80188 198 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 ESCO2Q56NI9 601 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 TMEM42Q69YG0 159 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 LAIR2Q6ISS4 152 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 HAGHLQ6PII5 290 aaPredicted RBP14.46□□□□□ -0.09
CLDN7-207ENST00000574070 DCDC5Q6ZRR9 648 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 Q6ZSR3 168 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 NLRC3Q7RTR2 1065 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 KRT74Q7RTS7 529 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 OR8B3Q8NGG8 313 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 OR13C3Q8NGS6 347 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 OR5AK2Q8NH90 309 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 NPRL2Q8WTW4 380 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 NEIL1Q96FI4 390 aaPredicted RBP14.46□□□□□ -0.09
CLDN7-207ENST00000574070 OR8B2Q96RD0 313 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 BEX2Q9BXY8 128 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 TLNRD1Q9H1K6 362 aa14.46□□□□□ -0.09
CLDN7-207ENST00000574070 PLCXD1Q9NUJ7 323 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms