RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 IGKV1D-16P01601 117 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 IGLV2-23P01705 113 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 TRBV12-3P01733 135 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 HLA-AP01891 365 aaKnown RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 APOEP02649 317 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 COX5BP10606 129 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 HIST1H1CP16403 213 aaKnown RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 OMGP23515 440 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 F8A1P23610 371 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 CXCR1P25024 350 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 PSMB9P28065 219 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 S100A5P33763 92 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 DRD3P35462 400 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 POLR2IP36954 125 aaKnown RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 CTRLP40313 264 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 PSMB2P49721 201 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 PPOXP50336 477 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 CAV2P51636 162 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 STC1P52823 247 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 DLX6P56179 175 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 RAB8AP61006 207 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 RPL23P62829 140 aaKnown RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 ARG2P78540 354 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 IGLV3-21P80748 117 aaPredicted RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 IFITM3Q01628 133 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 CYP24A1Q07973 514 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 FADDQ13158 208 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 NAB1Q13506 487 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 HERPUD1Q15011 391 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 RBMY1FQ15415 496 aaKnown RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 UAP1Q16222 522 aaPredicted RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 RSPO1Q2MKA7 263 aaPredicted RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 GOLGA7BQ2TAP0 167 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 CEACAM21Q3KPI0 293 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 SLC36A2Q495M3 483 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 COX19Q49B96 90 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 C9orf129Q5T035 196 aaKnown RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 TMEM236Q5W0B7 351 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 C8orf74Q6P047 294 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 MED27Q6P2C8 311 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 UGT2A3Q6UWM9 527 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 RTL4Q6ZR62 310 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 NCCRP1Q6ZVX7 275 aaPredicted RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 C6orf120Q7Z4R8 191 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 KRTAP7-1Q8IUC3 87 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 TGIF2LYQ8IUE0 185 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 KRT222Q8N1A0 295 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 GPD1LQ8N335 351 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 TMEM156Q8N614 296 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 TMEM251Q8N6I4 163 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 CD177Q8N6Q3 437 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 DCAF4L2Q8NA75 395 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 SUMF2Q8NBJ7 301 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 C19orf18Q8NEA5 215 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 OR10G4Q8NGN3 311 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 OR6N1Q8NGY5 312 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 OR10G6Q8NH81 332 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 ZNF461Q8TAF7 563 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 FAM45AQ8TCE6 357 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 PIFOQ8TCI5 191 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 RXFP4Q8TDU9 374 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 ABHD3Q8WU67 409 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 BLNKQ8WV28 456 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 ANKRD7Q92527 254 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 S100PBPQ96BU1 408 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 CMTM5Q96DZ9 223 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 MRAP2Q96G30 205 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 TMEM56Q96MV1 263 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 RILPQ96NA2 401 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 OR2M2Q96R28 347 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 TIMM17AQ99595 171 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 PITX2Q99697 317 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 HSD17B10Q99714 261 aaKnown RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 TMEM243Q9BU79 118 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 EMC6Q9BV81 110 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 SLC25A39Q9BZJ4 359 aaPredicted RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 UBXN6Q9BZV1 441 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 API5Q9BZZ5 524 aaKnown RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 LHX5Q9H2C1 402 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 TAS2R13Q9NYV9 303 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 DNAJC27Q9NZQ0 273 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 COMMD9Q9P000 198 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 EMC3Q9P0I2 261 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 SIGLEC7Q9Y286 467 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 PRG3Q9Y2Y8 225 aaPredicted RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 POLR3HQ9Y535 204 aaPredicted RBP1.5□□□□□ -2.17
CHD3-217ENST00000574022 ORC6Q9Y5N6 252 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 CSAG2Q9Y5P2 127 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 CACNA1FO60840 1977 aa1.5□□□□□ -2.17
CHD3-217ENST00000574022 NPHP4O75161 1426 aaPredicted RBP1.49□□□□□ -2.17
CHD3-217ENST00000574022 SIGLEC1Q9BZZ2 1709 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 TMEM210A6NLX4 147 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 GOLGA6L19H0YKK7 550 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 M0QZ92 97 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 DNASE2O00115 360 aaPredicted RBP1.49□□□□□ -2.17
CHD3-217ENST00000574022 TAAR5O14804 337 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 HAT1O14929 419 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 PSPHP1O15172 72 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 SLC16A4O15374 487 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 ZW10O43264 779 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms