RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 RNLSQ5VYX0 342 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 TMEM42Q69YG0 159 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 LRRC28Q86X40 367 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZNF573Q86YE8 665 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 LURAP1LQ8IV03 231 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 RDH10Q8IZV5 341 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR13C3Q8NGS6 347 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 CLDND2Q8NHS1 167 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 GATAD2BQ8WXI9 593 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 RNF166Q96A37 237 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 MND1Q9BWT6 205 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 CHST5Q9GZS9 411 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 NEK6Q9HC98 313 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 UBAP1Q9NZ09 502 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 CLEC2DQ9UHP7 191 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 PCDHGB5Q9Y5G0 923 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 DOCK11Q5JSL3 2073 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZNF732B4DXR9 585 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 CD5LO43866 347 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZFPL1O95159 310 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 LY6G6DO95868 133 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 CDK5R1Q15078 307 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 FAM76BQ5HYJ3 339 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 LINC01356Q8N9X3 169 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR10Z1Q8NGY1 313 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZNF671Q8TAW3 534 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 TSEN15Q8WW01 171 aaKnown RBP10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 HPSE2Q8WWQ2 592 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 PDCD1LG2Q9BQ51 273 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 TLNRD1Q9H1K6 362 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZNF665Q9H7R5 613 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 GPR173Q9NS66 373 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 DCAF16Q9NXF7 216 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 MIOXQ9UGB7 285 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 DHDHQ9UQ10 334 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 CSPG4Q6UVK1 2322 aa10.74□□□□□ -0.69
TRAPPC1-206ENST00000573989 TRAV38-1A0A0B4J264 116 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 A6NIN4 97 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 B4DSR2 109 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 E9PI62 339 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 CDIPTO14735 213 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 DENRO43583 198 aaKnown RBP10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 RGS10O43665 173 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 NDUFA2O43678 99 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 IGHV2-5P01817 119 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 CD2P06729 351 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 IGHV4-31P0DP07 118 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 CRHBPP24387 322 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 EEF1B2P24534 225 aaKnown RBP10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 THBS2P35442 1172 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 CFHR2P36980 270 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 PMELP40967 661 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 FUT6P51993 359 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 GTF2A1P52655 376 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 SLC35A2P78381 396 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZMYND11Q15326 602 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 FAM166AQ6J272 317 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 WDR82Q6UXN9 313 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 UTS2BQ765I0 119 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 NANOGP1Q8N7R0 232 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 BOLLQ8N9W6 283 aaKnown RBP10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 SCCPDHQ8NBX0 429 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR5D14Q8NGL3 314 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 GPR148Q8TDV2 347 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 LRRC29Q8WV35 223 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 FGGYQ96C11 551 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 SMIM19Q96E16 107 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 BORCS8Q96FH0 119 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 SMR3AQ99954 134 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 CDCA4Q9BXL8 241 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 GSX1Q9H4S2 264 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 PPP1R3EQ9H7J1 279 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 ERVK-18Q9QC07 812 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 POLDIP2Q9Y2S7 368 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZNF281Q9Y2X9 895 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 TLN2Q9Y4G6 2542 aa10.73□□□□□ -0.69
TRAPPC1-206ENST00000573989 LGALS8O00214 317 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 WNT9BO14905 357 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 OGG1O15527 345 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 TGFAP01135 160 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 MUC1P15941 1255 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 PCMT1P22061 227 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 PRKACBP22694 351 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 HAAOP46952 286 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 LMO4P61968 165 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 BDH1Q02338 343 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 MICBQ29980 383 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZNF404Q494X3 552 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 DCDC5Q6ZRR9 648 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZNF826PQ6ZT77 177 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 NLRC3Q7RTR2 1065 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 PRSS48Q7RTY5 328 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 WDR86Q86TI4 376 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 SERPINA12Q8IW75 414 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR51F2Q8NH61 342 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 RPL3LQ92901 407 aaKnown RBP10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 C1orf159Q96HA4 380 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 CCDC90BQ9GZT6 254 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR51I2Q9H344 312 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms