RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SURF2Q15527 256 aaPredicted RBP13.74□□□□□ -0.21
NUP88-207ENST00000573584 RHBDD2Q6NTF9 364 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 C2CD4CQ8TF44 421 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 S100A13Q99584 98 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 CNTNAP3Q9BZ76 1288 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 LMAN1LQ9HAT1 526 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 C1orf123Q9NWV4 160 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 FOXI3A8MTJ6 420 aaPredicted RBP13.74□□□□□ -0.21
NUP88-207ENST00000573584 SERPINE3A8MV23 424 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 MTRF1O75570 445 aaKnown RBP13.74□□□□□ -0.21
NUP88-207ENST00000573584 PRF1P14222 555 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 ZNF708P17019 499 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 RPL12P30050 165 aaKnown RBP13.74□□□□□ -0.21
NUP88-207ENST00000573584 CD80P33681 288 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 PTGER4P35408 488 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 PTGDSP41222 190 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 KCNJ3P48549 501 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 CTAG1AP78358 180 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 ACY1Q03154 408 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 KCNMB1Q16558 191 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 FAM76BQ5HYJ3 339 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 ZFP82Q8N141 532 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 OR5L2Q8NGL0 311 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 RNF138Q8WVD3 245 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 LYZL4Q96KX0 146 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 ARID1AO14497 2285 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 F5H5K5 113 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 K7EPK0 472 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 CST4P01036 141 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 FCGR3AP08637 254 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 NAT2P11245 290 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 KLK2P20151 261 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 SULT1A2P50226 295 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 HIST3H3Q16695 136 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 TMEM176BQ3YBM2 270 aaPredicted RBP13.74□□□□□ -0.21
NUP88-207ENST00000573584 NSUN5P2Q63ZY6 315 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 CRIP3Q6Q6R5 217 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 KMT5CQ86Y97 462 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 FAM71E2Q8N5Q1 922 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 COA4Q9NYJ1 87 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 PCDHGA1Q9Y5H4 931 aa13.74□□□□□ -0.21
NUP88-207ENST00000573584 OR2J2O76002 312 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 CD5P06127 495 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 FCGR2AP12318 317 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 ALDH3B1P43353 468 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 SPEM2Q0P670 501 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 UBE2V2Q15819 145 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 NKAIN1Q4KMZ8 207 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 SEMA6DQ8NFY4 1073 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 SULT4A1Q9BR01 284 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 ZNF160Q9HCG1 818 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 IGLV3-12A0A075B6K2 115 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 IGKV1D-8A0A087WSZ0 117 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 BTNL8Q6UX41 500 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 ZNF2Q9BSG1 426 aaPredicted RBP13.73□□□□□ -0.21
NUP88-207ENST00000573584 MYOTQ9UBF9 498 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 SPAG17Q6Q759 2223 aa13.73□□□□□ -0.21
NUP88-207ENST00000573584 IGLV3-32A0A0A0MS00 114 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 PQLC2LA1A4F0 135 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 C9JQL5 133 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 FAHP16930 419 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 CPT2P23786 658 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 GUCA1AP43080 201 aaPredicted RBP13.72□□□□□ -0.21
NUP88-207ENST00000573584 C6orf201Q7Z4U5 140 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 SULF2Q8IWU5 870 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 SKA3Q8IX90 412 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 FNDC9Q8TBE3 224 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 WDR77Q9BQA1 342 aaPredicted RBP13.72□□□□□ -0.21
NUP88-207ENST00000573584 SDK1Q7Z5N4 2213 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 RALGAPA1Q6GYQ0 2036 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 TLX3O43711 291 aaPredicted RBP13.72□□□□□ -0.21
NUP88-207ENST00000573584 FCGR2CP31995 323 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 ID4P47928 161 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 F2RL1P55085 397 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 CLDN17P56750 224 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 SMCO1Q147U7 214 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 TMEM268Q5VZI3 342 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 WDR74Q6RFH5 385 aaPredicted RBP13.72□□□□□ -0.21
NUP88-207ENST00000573584 SGPP2Q8IWX5 399 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 SLC25A45Q8N413 288 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 DMBX1Q8NFW5 382 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 SHDQ96IW2 340 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 SMIM3Q9BZL3 60 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 PARP11Q9NR21 331 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 PLA2G2EQ9NZK7 142 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 FBXL17Q9UF56 701 aa13.72□□□□□ -0.21
NUP88-207ENST00000573584 FBXO9Q9UK97 447 aaPredicted RBP13.72□□□□□ -0.21
NUP88-207ENST00000573584 MCTS1Q9ULC4 181 aaKnown RBP13.72□□□□□ -0.21
NUP88-207ENST00000573584 DHRS7CA6NNS2 312 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 JTBO76095 146 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 GABRR1P24046 479 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 CTSSP25774 331 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 THBS4P35443 961 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 ARL6IP1Q15041 203 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 AKIRIN2Q53H80 203 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 DHRS11Q6UWP2 260 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 Q6ZRG5 221 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 CADM4Q8NFZ8 388 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 OR2M3Q8NG83 312 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 PLEKHJ1Q9NW61 149 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms